>PF17054 (354 residues) MAAYAAFKHVELYNVGKAKKRVLRAPGGGSSDIFGSEMPQTPRGHVKNRMASNIFAAEKD NGVKNNVRQGAHRFYFIGDAPRRGQKTVDSHNRLFGEPTRPITPAKNHMKSSIPFGGQNT EAAAAQKLLTTNGHYNGKSGSVSSASSSVSSSTENLKMNSGSRGVFRNMSTAPGSKSNPI PSVRDPACPLTPEPSIPEIPPPDVLPIDIPCKEIEVGDIPADNYTYNQSDKRDEAIQSRC DSGTNPEKPYSLNHMEGPADLQEPMHPCPDTLKEAAQQCKMDSRNPITGLGLNGDGVGGL KPKKQKNREGNPVTGEGYKPGANDFHQRADSSQGGTPIINKNRVPPGGYSSGLW |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MAAYAAFKHVELYNVGKAKKRVLRAPGGGSSDIFGSEMPQTPRGHVKNRMASNIFAAEKDNGVKNNVRQGAHRFYFIGDAPRRGQKTVDSHNRLFGEPTRPITPAKNHMKSSIPFGGQNTEAAAAQKLLTTNGHYNGKSGSVSSASSSVSSSTENLKMNSGSRGVFRNMSTAPGSKSNPIPSVRDPACPLTPEPSIPEIPPPDVLPIDIPCKEIEVGDIPADNYTYNQSDKRDEAIQSRCDSGTNPEKPYSLNHMEGPADLQEPMHPCPDTLKEAAQQCKMDSRNPITGLGLNGDGVGGLKPKKQKNREGNPVTGEGYKPGANDFHQRADSSQGGTPIINKNRVPPGGYSSGLW | |||||||||||||||||||
1 | 5jcss | 0.09 | 0.09 | 3.34 | 1.62 | SPARKS-K | LSILLSLLEKRELTIPSRGETVKAANGTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKF--PILTNLIPKLIDSYKNVKSIYMNTKFISLNKGAHTRVVSVR--DLIKLCERLDILFKNNGINKPDQLIQSSADCFAGAIGEFKALEPIIQESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEETGTAKMLAKKLTVINVSQQTETPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKL---WNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLDKW | |||||||||||||
2 | 2atyA | 0.09 | 0.08 | 3.13 | 1.18 | MUSTER | ------------------DISCGSPPPILNGRISYYSTPIAVGTVIR-----SGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNK------YSSCPEPIVPGGYKIRGSTPYRHGDS-ACKTNFSMNGNKSVANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFFVDDVEVHTAQTQPREEQFNSTFRSVSEPIMHQDWLNGKERVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSTDFFPEDNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEGNTF | |||||||||||||
3 | 2pffB | 0.17 | 0.16 | 5.19 | 1.04 | HHsearch-2 | MDAYSTLSHGSLEHVLEQFNKILPEPT----EGFAADEPTTPAELVGKFLGSSLPSKVGFDQVLNLCEFENCYLEGEDTTLVKTKELIKNYITARIMAKRPFDKKSNSALEGAIFGGQGNTDDYFEELYQ-TYHVLGDL--IKSAE-TL---SELIRTTLDAEKVFTQGLNILELENPSNTPD--KDYLLSIPISCPLIEITVLFFIGVRCYEAYPNTSLPP-SILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNS-----------HLPAGKQVEISLVNGAKNLVVSLTLRKAFSERKLKLPVASPFHSHLLVP-ASDLINKDLVKNNVSFNAKDIQIPTFD-GSDLR | |||||||||||||
4 | 2bsgA | 0.09 | 0.08 | 3.04 | 2.46 | Neff-PPAS | EILGADTQYGSEGSMNRPTVSVLRNVEVLDKNIGILKTSLETANSDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQIEVGNLREEL--------VYSRLNEIDTKQTTVESDISAIKTSISIITSVNTNTDNIASINLEIKQRLTVIETSI-----IKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGS----------------TVEERGL----TNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEW | |||||||||||||
5 | 2nbiA1 | 0.09 | 0.09 | 3.52 | 1.87 | PROSPECTOR2 | QPSDLNLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTR | |||||||||||||
6 | 6ezoE | 0.06 | 0.06 | 2.42 | 1.42 | SPARKS-K | AVVMAVGGGSRMTDLTSSIPKPLLPVGNKP--LIWYPLNLLERVGFEE---VIVVTTRDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDVLSC-DLI-------TDVALHEVVDLFRA-------YDASLAMLMRKRDF--IGVDSTGKRLLFMANEADLDEELV----IKGSILQKHPRIRFHTGLVDAHLYCLKKYIDFLMENGSITSELIPYLVRKVHIMKEGLCSRVSTLGLYMEANRQVPKLLSSAQIV------SKHLVGVDSLIGPETQ-IGEKSSIKRSVIGSSCLIKDR--VTITNCLLMNS-VTVEEGSNIQGSVICNNAVIEKGADIKDCL | |||||||||||||
7 | 2nbiA1 | 0.13 | 0.13 | 4.48 | 1.18 | MUSTER | SECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCC--ATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSS---APSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDV---LPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCRPDNPMFTPSPDGSPPICSPMMPSPEPSSQPSDCGEVIEECPIDACFLPSDSARPPRPLPFPNNIGCPSC--CPFECSPDNPMFTPSPDGSPPNCSPTMLPPSAVTVPLT | |||||||||||||
8 | 3j8dA | 0.10 | 0.10 | 3.66 | 2.38 | Neff-PPAS | -ASESVDSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTDSVETDDAATQQNNEDPYTFGGGTKLEIKQVQLLQPGAELVKPGASMKSGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKYNEKFENRASLTVDKHSSTAYMQLTSEDSAIWFFPWYFDVWGTGTTVTVSRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEA--THKTSTSPIVKSFNRSAKTTAPSVYPLAPVCGGTTGSSVTVKGYFPEPGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTI | |||||||||||||
9 | 2nbiA | 0.11 | 0.11 | 3.97 | 1.82 | PROSPECTOR2 | LPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPPSPLPSPTE | |||||||||||||
10 | 6ezoI | 0.06 | 0.05 | 2.35 | 1.35 | SPARKS-K | NVALIDYTLEFLTATGVQETFVFCCWKAAQKEHLLKSKWCRPTSLNV------VRIITSELYRSLGDLVRSDFLLVYGDSNINITRALEEHRLRRKLEKNVSV----MTMIFKESSPSHPTR-----CHEDNVAVDSTTNRVLHFQRRFAFPLGVEVRYDLLDCHISICSPQDNFDYQTRDDFVRGLLVNEEILGNQ------IHMHKEYGARVSNLHMYSAVCADVIRRWVYPLTPEANSCTHSRHNIYRGPEVSLGHGS-ILEENVL-----LGSGTVIGSNCFITNSVIGPGCHIGDNVVLD-----QTYLWQGVRVAAGAQIHQ--SLLCDNAEVKERVTLKPRSVLTSQ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |