Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | LLKALEKLPLHSKTLDLLACKLKGDELKTVIIPLAKLVSNLESSRAETQRIKALESIIYHTHFVWGSPLPVHLKMFQSHYTDMLMHWPYERHRSILNMEKPRSTSLRYRWEDSSKTVLSMAEYSKNPWIEDNILSKKLTIIQRDLLFHSVFSHYLFLKANPRLCNNGRNLPIPIVEIPMRPLGNDIAVSRIKNLFKSKVAHTYRILAIENPVLSRGSENILSEII |
1 | 5cwmA | 0.09 | 0.08 | 2.90 | 0.72 | SPARKS-K | | PEDELKRVELVKEAEELLRQAKEKEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSE-------------EALERALRVAEEAARLAKRVLELAEKQG-------------------DPEVARRAVELVKRVAELLERIAREEARELQERVKELR |
2 | 4mu6A | 0.14 | 0.13 | 4.37 | 0.91 | FFAS-3D | | -LKDLSKAPI-PWIHSSVTATLKTEVKKNLEQQSYKAQLAEDKIQKEQDDAEALDKKLKEVLTRELNHIPTQISEQQTELRLLHYKLEEIKIQSLFEQEVNNKIKLNEIEKRASVRSQHHTKRVKRAQATGEDILSTLSGKNQSILLRSIQKQHHALEKKCS----------------------DLIQEADQINYPLFLEELQKYLNKKKHTLSSQEVDALKSVI |
3 | 1vt4I3 | 0.09 | 0.05 | 2.02 | 0.36 | HHpred | | ----------------------------EYA-LHRSIVDHY----NIP------------KTFDSDDLIPPYLDQY-------------FYSHIGHHLKNIEHPER-MTLFRMVFLDFRLEQKIRHDSTAWNASGSILNTDNDPKYERLVNAILDFLPKIEEICSK----------------------------------YTDLLRIALMAEDEAIFEEAHKQV- |
4 | 4uosA | 0.09 | 0.07 | 2.74 | 0.72 | MUSTER | | DNEEVKKM-L-EKMIEEIKKMLEKA-IKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAE----KILKKVKELGV-DNEEVKKMLEKMIEEIKKMLE---------------KAIKKVKEMLEKMIKEIKKMLENG---EDSEKI--------LK------KAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELG |
5 | 5h7cA | 0.12 | 0.10 | 3.58 | 0.71 | CNFpred | | LLAEAKSL-NVNQAVKQLAEKAKEAT---DKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKATDKELVIYIVKILAELAKQ--STDSELVNEI----VKQLAEVAKEAT---------------------------DKELVIYIVKILAELAKQSSELVNE----IVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLPNLNEEQRNAFIQSL |
6 | 1vt4I3 | 0.12 | 0.07 | 2.52 | 0.79 | HHsearch-2 | | ----------------------------EYA-LHRSIVDHY----NIP------------KTFDSDDLIPPYLDQY-------------FYSHIGHHLKNIEHPE-RMTLFRMVFLDFRLEQKIRHDSTAWNASGSILN----------TLQQLKFYK--PYICDNDPK------------------YERLVNAILDFLPYTDLLRIALMAEDEAIFEEAHKQVQ |
7 | 2yfaA | 0.04 | 0.04 | 1.98 | 0.82 | Neff-PPAS | | -DTAAANTLAKDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMAR----------PEADSVRLAQYQLISKARQQLLQVRIDVRGYIAEN-------SSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER----- |
8 | 1vt4I3 | 0.09 | 0.05 | 2.02 | 0.62 | HHsearch | | ----------------------------EYA-LHRSIVDHY----NIP------------KTFDSDDLIPPYLDQY-------------FYSHIGHHLKNIEHPER-MTLFRMVFLDFRLEQKIRHDSTAWNASGSILNTDNDPKYERLVNAILDFLPKIEEICSK----------------------------------YTDLLRIALMAEDEAIFEEAHKQV- |
9 | 5cowA | 0.12 | 0.11 | 3.92 | 0.61 | SP3 | | KFTYLLLQPLTEATLSDAVNFIVEKYSAELPSQLGCQFFFLVTRTLAHDQRELAKLVQTLIPRPVRLEFPGLQRSVFKSSVFLGHH----IIQIFMGAKKPFQQDFECPWRRLAAELLKKFSVSVVEKVFDNPVALIPHESDNEALIELVTNALRFALWIVEFYETET---------------NEKSIKELAFLDHSSKTLLIESFTKFLQGKDVKDQDHLKRII |
10 | 5cwmA | 0.09 | 0.08 | 3.04 | 0.78 | PROSPECTOR2 | | DPEDELKEKLVKEAEELLRQAKEKGSEEDLEEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRI-------------AKESGSEEALERALRVAEEAARLAKRVLELAEKQ---------------GDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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