Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | AELNGAMGDLGTYIPIVLALTLAKDLNLGTTLIFTGIYNVVTGVLYGVPMPVQPMKSIAAVAISDSSGFNIPEIMAAGICTGAILLVLGVTGLMQMVYKFIPLSVVRGIQLSQGLSF |
1 | 5da0A | 0.21 | 0.21 | 6.53 | 1.81 | SPARKS-K | | KDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILI |
2 | 5da0A | 0.22 | 0.21 | 6.75 | 1.22 | FFAS-3D | | -DVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPMISAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILI |
3 | 3qe7A | 0.12 | 0.12 | 4.22 | 1.21 | HHpred | | QTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFIGKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVKTGWLDVLFPPAAMGAIVAVIGLEL |
4 | 5da0A | 0.21 | 0.21 | 6.53 | 1.59 | MUSTER | | KDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILI |
5 | 5xlsA | 0.12 | 0.12 | 4.22 | 1.19 | CNFpred | | QTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKIPAYLGSSFAFISPVLLLL-PLGYEVALGGFIMCGVLFCLVSFIVGTGWLDVLFPPAAMGAIVAVIGLEL |
6 | 3qe7A | 0.12 | 0.12 | 4.22 | 2.26 | HHsearch-2 | | QTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFIGKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVKTGWLDVLFPPAAMGAIVAVIGLEL |
7 | 5da0A1 | 0.21 | 0.21 | 6.53 | 0.92 | Neff-PPAS | | KDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLVKHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILI |
8 | 3qe7A | 0.12 | 0.12 | 4.21 | 2.76 | HHsearch | | QTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFIGKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVKTGWLDVLFPPAAMGAIVAVIGLE- |
9 | 5da0A1 | 0.22 | 0.22 | 6.99 | 0.58 | PROSPECTOR2 | | QREWFARKDVLALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGVKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILI |
10 | 5da0A | 0.23 | 0.21 | 6.44 | 0.62 | SAM | | -----------ALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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