Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | YFVSYKNAEAYCVDNGAVLPADQTEAAHQSLQSAIKRVITGSDAFSYLGGDAVYSSGEAIEADKRCKPGDIASSRYCVYRWNKGLFAKALPDGQGVAFWRGSYIKYDGAASMNGYPSFWGGEYPKRGQLYTLSWYHTGDDVTTWYDGKDMSGRIKWASDNPDTKTENYVILCE |
1 | 5vybA | 0.19 | 0.12 | 3.90 | 1.00 | SPARKS-K | | EEKVWSKSEQNCVEMGAHLVVFNT----EAEQNFIVQQLNESFSY-FLGLSDPQGNNN--------------------WQWIDK-------------------------TPYEKNVRFWHLGEPNHSAEQCASIVFWKPTGWGWNDVICE---------------TRRNSICE |
2 | 6a7tA | 0.17 | 0.11 | 3.60 | 1.15 | Neff-PPAS | | TERGWEDSKTFCESQNAALVTVESSEEDDFIRGVISAQSAFHYYWIGGSWDA----------------------EHSEYRWIDGSSISFN---------------------------GWGPNRPDADEGCMDYLNYK-EIVWQWNDHQDCV-------------NTKGPSICE |
3 | 1g1tA1 | 0.19 | 0.12 | 3.90 | 1.00 | SPARKS-K | | EAMTYDEASAYCQQRYTHLVAIQNKEEIEYLNSIL----SYSPSYYWIGI---RKVNNV-------------------WVWVGT------------------------QKPLTEEAKNWAPGEPNNDEDCVEIYIKREKDVGMWNDERCS---------------KKKLALCY |
4 | 6a7tA | 0.19 | 0.12 | 3.74 | 0.78 | FFAS-3D | | ---GWEDSKTFCESQNAALVTVESSEEDDFIRGVISAQSAFH--YYWIGGSWDAEHSE--------------------YRWIDGSSISFNG---------------------------WGPNRPDADEGCMDY-LNYKEIVWQWNDHQDCVNT-------------KGPSICE |
5 | 6a7sB | 0.17 | 0.11 | 3.60 | 0.36 | HHpred | | GSRGWEGSKAFCESKDASLVTVECSKEDDFIRGI-LSG-QTAKHYYWIGARWNEE--------------------HNDYRWIDG--SPF------------------------TF-IGWGPGKPDN-NKGCLDYLNYKEVVWQWNDVDCEN--------------TNGPCICE |
6 | 4c16A1 | 0.17 | 0.14 | 4.58 | 0.95 | MUSTER | | EAMTYDEASAYCQQRYTHLVAIQNKEEIEYLNSIL----SYSPSYYWIGIRKVNNVWVWVGTQKPLTEEAKN--------WAPGEPNNRQKDEDCVEIYI---KREKDVGMWNDER---------SKKKLALCYTAACTNTSCSGHGECVETINNYTCKDPGFSGLK----CE |
7 | 1tn3A | 0.13 | 0.08 | 2.61 | 0.99 | CNFpred | | QTKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVG-NEAEIWLGLNDMAA-AYKNWETEITAQPDGGKTENCAVLSGAGKWFDKR---RDQLPYICQFGIV------------------------------------------------------------------- |
8 | 1qddA | 0.19 | 0.12 | 3.90 | 0.61 | HHsearch-2 | | DRETWVDADLYCQNMSGNLVSVLTQAEGAFVASLIKESGT-DDFNVWIGLHDPKK--------------------NRAWHWSSGS-------------------------LV-SY-KSWGIGAPSSPGYCVSLT--SSTGFQKWKDVPCED---------------KFSFVCK |
9 | 6a7sB | 0.18 | 0.11 | 3.58 | 1.10 | Neff-PPAS | | ---GWEGSKAFCESKDASLVTVECSKEDDFIRGILSGQTAKH--YYWIGARWNE--------------------EHNDYRWIDGSPFTFI---------------------------GWGPGKPDNNKGCLDYLNYK-EVVWQWNDHVDC-------------ENTNGPCICE |
10 | 1uexA | 0.16 | 0.10 | 3.26 | 0.72 | HHsearch | | KVGTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKFVYDAWIGLRDESK------------------TQQCSPQWTDGS-------------------------SV-VYE-NVDE-----PTKCFGLDV--HTEYRTWTDLPCGE---------------KNPFIC- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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