Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | IMDQVQQASAASSGSSISQPDGERKKPTSPVKPMPQSIEYRARVKKNADSKNNFNMERSYTDHKEAKKQNLKNHSRDFNDKLPNNEDRVRGSYA |
1 | 3hgfC | 0.04 | 0.03 | 1.77 | 1.67 | SPARKS-K | | --KKIENIVTKIDKKKYIYKKLLNEEIEKDKTSLEEVKNINMSYGKSLNKLFL-EKIKKKSENMIKSMEKYIKDLDEIKEQSPKAEMN------ |
2 | 2dfsA | 0.14 | 0.14 | 4.73 | 1.03 | MUSTER | | ITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLEEIAKLRKELHQTQTEKKTIEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAK |
3 | 3hgfC | 0.08 | 0.07 | 2.94 | 1.46 | Neff-PPAS | | ---KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKI--KKKSENMIKSMEKYIKDLDEIKEQSPKAEMN-- |
4 | 5jcss | 0.07 | 0.07 | 3.01 | 1.38 | SPARKS-K | | ILGGYEQVDLTRQISYITEELTNIVREMNMKLSPNATAIMEGLNLLKYLLNNIVTPEKFQDFRNRFNRFFSHLEGHPLLKTMSMNIEKMTEIIT |
5 | 3tb8A | 0.15 | 0.15 | 5.01 | 0.40 | FFAS-3D | | VRERMRRAEPAADGVGAASRDLEKHTPQVPLRPMTYKAAVDSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTF- |
6 | 1na6B3 | 0.17 | 0.10 | 3.15 | 0.20 | HHpred | | --------------------------------------ATQAITEGNKKPDFLFPSAGAYHDTENLRMLAVKTTCKDRWRQILNEADKIHQ--- |
7 | 6etxG | 0.06 | 0.06 | 2.72 | 0.98 | MUSTER | | QLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVP |
8 | 4dvyP | 0.31 | 0.10 | 2.89 | 0.81 | CNFpred | | -----------------------------------------------------------------AYTQNLKGIKRELSDKLEKISKDLKDFSK |
9 | 1vt4I3 | 0.18 | 0.12 | 3.80 | 0.78 | HHsearch-2 | | LEQKIRHDSTAWNASSLNTLQQL--KF--------------------------------YKPYICDNDPKYERLVNAILDFLPKIEENLICSKY |
10 | 2xnxM | 0.05 | 0.05 | 2.44 | 1.31 | Neff-PPAS | | ALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKELEAITREQEINRNLLGNAKLELDQLSSEKEQLTIEKAKLEEEKQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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