Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LNSGRQSPSQNERWARPKHIIEDEIKQSEQRQSRSQSTTYPVYTESTDDKHLKFQPHFGQQECVSPYRSRGASGSETNRVGSNHGINQNVNQSLCQEDDY |
1 | 5jcss | 0.06 | 0.06 | 2.62 | 1.12 | SPARKS-K | | AFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFQVHDILLLSDEEPIEESLAAVIPISHANNVLNCTEYSEKKIAERLYVF |
2 | 1d7mA | 0.12 | 0.12 | 4.23 | 1.14 | Neff-PPAS | | -EMANRLAGLENSLESEKVSREQLIKQKDQLNSLLASLESEGAEREKRLRELEAKLDETLKNLELEKLARMELEARLAKTEKDRAILELKLAEAIDEKSK |
3 | 4nl6A | 0.09 | 0.09 | 3.41 | 1.04 | SPARKS-K | | TGYGNREEQNLSDLLSPICEVANNIEQNAQENE-NESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPG-LKFNGPPPPPPPPP |
4 | 2kvrA | 0.12 | 0.07 | 2.47 | 0.32 | FFAS-3D | | ----------------PQQLLQEEKRIEAQKRKERQEAHLYIVAEDQFCGHQGNDMYDEEKVKYTVFKVLKNSS-------------------------- |
5 | 4a17X | 0.15 | 0.11 | 3.71 | 0.26 | HHpred | | -ESEDFA-KLDSSWRRPRGI-DNRVRRRFRGQRRMAKIGFAS---DAATKHLL----------PNGFKKFLRNPTYCGEIAHNISAQVKA---------- |
6 | 2nbiA2 | 0.17 | 0.17 | 5.57 | 0.77 | MUSTER | | PSSQPTGPQPSSQPSECADVLEDTCFLPFDDSSRPPDCTDPS-VNRPDCDKLSTAIDFTCPTCC-PTQCRPDNPMFSPSPGSPPVCSPTMMPSPLPSPTE |
7 | 3odxA | 0.15 | 0.03 | 1.01 | 0.53 | CNFpred | | --------SERKNWCALITETAGSLKVP------------------------------------------------------------------------ |
8 | 1vt4I3 | 0.19 | 0.16 | 5.17 | 0.87 | HHsearch-2 | | ------------EYALHRSIVDHYNIPKTFD-SDDLIPPYDQYFYSHIGHHLKNIERMTLFRMVFLFRRHDSTAW--NASGSILNTLQQLKFYKPYICDN |
9 | 3j9aA | 0.07 | 0.06 | 2.42 | 1.14 | Neff-PPAS | | -NFKVRDPVIQER-------LDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQTLRDQKP------------ |
10 | 4v198 | 0.17 | 0.06 | 1.98 | 0.48 | HHsearch | | KLFVFCNKTTTSFWKRRNWYADDPYQ---------------KYQDRTNLKV------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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