Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | FSTTGQSRGPLEPPKIPKPWTLSCLRPAPPLRPSAALGYKERMSYILKDTSKSPRTMKKFLPKRKTERKPSDDEFILRKSTAALEEDAQILKVIEAYCTGASFQQCVSS |
1 | 3hgfC | 0.06 | 0.05 | 1.97 | 1.01 | SPARKS-K | | KIENIVTKIDKKKYIYKKL------------------LNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKKKSENMIKSMEK-----------YIKDLDEIKEQS |
2 | 6e5pI | 0.07 | 0.06 | 2.66 | 1.06 | Neff-PPAS | | -AVIKTPGSSVKSGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVS-YARQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEY------FCVRRGSCDYCGD |
3 | 5yfpA | 0.08 | 0.08 | 3.20 | 0.96 | SPARKS-K | | TFRKERKTNDINPVFKNSFECLQTMRQECIVYQNFVEVFSKHNFEEYIKHFNDPDAPPILLDTVKVMQSDRAVIETQLVSRQPIVTR---LSSYFVELVKAEPTVAPAL |
4 | 4hadA2 | 0.19 | 0.06 | 1.77 | 0.39 | FFAS-3D | | -----------------------------------------------------------------------------KEEVVTLENSKLNQKVIDAIYRASEKDGWEA- |
5 | 5eybA | 0.10 | 0.06 | 2.04 | 0.32 | HHpred | | ----------------------KLLVQEMPSFTRRTILR----------------HLRALYNI------PGYEKYSSGRGDFGVQETAIISQEVHNFIMDQGWS----- |
6 | 5tx1R | 0.17 | 0.17 | 5.46 | 0.90 | MUSTER | | NGTGGAFEGGLFSPTRLPGWAGSTVRPVLPANSSTMTYATVGNSSLDSTAAAAAAAAAMTATRLASSYMPSSGSSPSVPSSIIAEEKLLALLAELEALSRSELREQQQQ |
7 | 5uflA | 0.12 | 0.03 | 0.97 | 0.48 | CNFpred | | ------------------------------------------------------------------------------------DSSSKVLELLLAFCSVTQLRHMLTQ |
8 | 5eybA2 | 0.11 | 0.04 | 1.32 | 0.53 | HHsearch-2 | | ----------------------------------------------------------------KN---------SSGRGDFGVQETAIISQEVHNFIMDQGWEYQIWA |
9 | 3hgfC | 0.11 | 0.08 | 3.01 | 1.01 | Neff-PPAS | | -KKIENIVTKIDKKKYIYK------------KLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKI-----------KKKSENMIKSMEKYIKDLDEIKEQSPKAE |
10 | 5eybA2 | 0.11 | 0.04 | 1.31 | 0.53 | HHsearch | | ----------------------------------------------------------------KN---------SSGRGDFGVQETAIISQEVHNFIMDQGWSEQFC- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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