Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | RRGMDEALHQSVDERRGSASDPESQSISRSTTPGSSNVTEESGAGGGQSQTGSIQDDSPHPSSPSSDVGEDSGKVPV |
1 | 3bogA | 0.10 | 0.10 | 3.81 | 1.38 | SPARKS-K | | GADGAHGVGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPGA |
2 | 3j9aA | 0.08 | 0.08 | 3.04 | 1.28 | Neff-PPAS | | FKVRDPVIQERLDH-----DYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQ |
3 | 5jcss | 0.01 | 0.01 | 1.35 | 1.28 | SPARKS-K | | DELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFAQVHDILLLSDEEPIEE |
4 | 3j21D | 0.13 | 0.12 | 4.05 | 0.38 | FFAS-3D | | ----PDLIRRAVHRIQPQGRDPMAGKRRVTENIGKGHSMARV-ERLKTPPRYAAFVPRTHPPKVEKIIWEDINK--- |
5 | 6ahfC3 | 0.21 | 0.18 | 5.77 | 0.21 | HHpred | | --GQMDAIKAVSNAVRLSR-----SGLANPRQPASFLFLGLSGSGKTELGFNDKYAVSKLLGTTAGYVGYDEG---- |
6 | 3bogA | 0.19 | 0.18 | 5.88 | 0.98 | MUSTER | | CKGADGAHGVGCPGTAGAAGSVGGPHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPG-AP- |
7 | 3jcmA | 0.33 | 0.08 | 2.34 | 0.69 | CNFpred | | ---------------------RDCIDISIFSTPGSVSLS-------------------------------------- |
8 | 1nktA3 | 0.21 | 0.08 | 2.47 | 0.49 | HHsearch-2 | | GRRYNEGMHQAIEAKEHVEIKAENQTLA------------------------------------------------- |
9 | 2v6lZ | 0.09 | 0.09 | 3.43 | 1.18 | Neff-PPAS | | --PNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQ |
10 | 5oeoC | 0.23 | 0.17 | 5.30 | 0.47 | HHsearch | | -GADKEDDQEHPSEGRASLA-LPTSSLSRTASQ-SSSHRGWNTLG--HLNLGL-------------NLSEGDGEE-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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