Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE |
1 | 5cwlA2 | 0.20 | 0.20 | 6.32 | 0.87 | SPARKS-K | | GNTDAVREALEVALEIARESGTEEAVRLALEVVKRVSDEAKKQGNEDAVKEAEEVRKKIEEESGGW |
2 | 5fmgF2 | 0.12 | 0.09 | 3.21 | 0.54 | FFAS-3D | | -DAKVLTKFMQNECLSHKLYNENINIESLVRSVADKYQKNTQKSSKRA-FGV-------------- |
3 | 6cgrl | 0.26 | 0.15 | 4.68 | 0.24 | HHpred | | ---QAQRTAAAAALENAAMQAAELPVD-IERRLRPIERNVHEI----------------------- |
4 | 1qt1A | 0.18 | 0.18 | 5.91 | 0.67 | MUSTER | | EDFDGVWASAAGCMRNYLILKERAAAFRADPEVQEALRAARLDELAQPTAGLQALLPDRSAFEDFD |
5 | 5cwfA | 0.15 | 0.12 | 4.06 | 0.45 | CNFpred | | NDDEVAREIARAAAEIVEALRENNSDEMAKKMLELAKRVLDAAK--------------NDDETARE |
6 | 4ct8A | 0.30 | 0.17 | 5.06 | 0.40 | HHsearch-2 | | VSAETARAMAEAARS-----------------------------LFGSTYALATTGVAGPDPGEPP |
7 | 2x43S | 0.13 | 0.12 | 4.21 | 0.84 | Neff-PPAS | | ----MDQETRDQMKNAAAEAKDNVHDKIQELKDDVGNKAAEVRDAVSSTVESIKDKLSGGSSSRAS |
8 | 1sr8A1 | 0.25 | 0.24 | 7.53 | 0.48 | HHsearch | | TTGTTASAAAVAAIASLKEKVEKVAKLQILENFIKASREFNFGKTGNEKVGIKGISILGTTGFEP- |
9 | 2xguA | 0.15 | 0.15 | 5.09 | 0.59 | SP3 | | TITYFGVISINFTSVDINMLLNVTPAAEKQLVIDKIKEKAIAWDEMHPPPPADAAGIRGIGLSPEE |
10 | 2lhrA | 0.13 | 0.12 | 4.23 | 0.42 | PROSPECTOR2 | | SDQKLLAPYHKAQVYELEKLQEKLPEKYKAEYKKKLDQTRVE---LADQVKSAVTEFENVTPTNDQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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