Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | KHFIEVIAAIAIIFVLGGCSMLQSAINDIKGSLVGNDYTIFTYDNYGSKVLETSGRKISITGNPVKTSDYDSDGDVKERYELSSVITITVDGKEIESCGDTCVFVQKGLKPDVNFTKKSIKGKESGALSSYASVARFLNKYKNMFGKSRIVVIKSQLGQPIAAYSGDEVYWKIPKNLPKMTKLMIDGKALYIHRANFQIIDKDLL |
1 | 3lifA | 0.10 | 0.09 | 3.21 | 0.68 | SPARKS-K | | AQSETNLSHSLAEHATHTFQGADVVLDDIVSFKWRPHPDVAILDADGQLTYAS--------VKPVPALDNSDRSRANDDHTLLITGPIQSRTSGVWVFVVSRRLET-----------------TDGKFFGVVVATYFSTFYKTFLGPGGSISLLHSDGRLLIQWPSPDGYYLTVSPFDG-------LTKYLAYRRVTVARTEDSV |
2 | 6mjpC | 0.09 | 0.07 | 2.61 | 0.58 | FFAS-3D | | ---LSRIVYVLLLFIASWSLYYLLGQEQDSKMFSGENLENISYDEQGIRNYVITSIHLDHYAKSGNTLFKAPREGTLQEWEITARRGILSKDQVLTLYDDVLAKNLLPDSGFDTLTTSEMSIQLKS----------------RDFWADKPVELRGPQF----ETHGQAMKGNFADHSAEL------------------------- |
3 | 6mjpC | 0.08 | 0.06 | 2.30 | 0.38 | HHpred | | SRIVYVLLLFIASWSLYYLLGQEQ--DSKIPMFSGENLENISYDEQGIRNYVITSIHLDHYAKSG------------NTLFKAPILKVYREGQEWEITARRGILSK----------DQVLT-LY---------------------DD--VLAKNLLPDSGFDTLTTSEMSIQLKS-----RDFWADKP-VELRGPQFETHGQ--- |
4 | 2bibA1 | 0.10 | 0.10 | 3.57 | 0.64 | MUSTER | | DRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLD--NVHGAEDKYGPLIGKVDLMKFNHDTNKSNTKDFIKNLS-----PSLIVQ--WKNGVVNWLRGIERINAASKDY-DATVFDIRKDGFVNISTSYKPIPS--- |
5 | 4ggcA | 0.08 | 0.05 | 2.09 | 0.71 | CNFpred | | ------------------------------------YISSVAWIKEGNYLAVGTSAEVQLWDVQKRLRNMTSH--------SARVGSLSWNSYILSSGSGHIHHHDV---RVAEHHVATLSGH-----------------------SQEVCGLRWADGRHLASGGNDLVNVWPSA---AVKAVAWCSNVLATGGGHIRIWNVCSG |
6 | 3n91A2 | 0.11 | 0.06 | 2.09 | 0.40 | HHsearch-2 | | DEVVNISTKSK-DNLLTLKTKDE------SG-KDISYTVRLSFAEDGSCTVHSGSQNVVVSGSGK----FVSKNSLGG--KDRNAITVNLTNNIQLATKDTLVLRTRNVY--GGKLEVVRK------------------------------------------------------------------------------------ |
7 | 3jc8Na | 0.09 | 0.08 | 3.14 | 0.98 | Neff-PPAS | | -VLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSASATPKKVWVKTFSENNNAVSIDGSAV-----SHDEVAEFMRGGVVWTPKGMGRLVDRRRDSKTARVEMLTIEEFPEAQVSPFFKNIDLQTAKQVGGAQVGVPILVEFKITMTSNY-------------- |
8 | 6mitC | 0.08 | 0.05 | 2.16 | 0.61 | HHsearch | | KTRRW-VIIL-LSLVALILIG---VNL--DPTYKSDHSDTVVYSPEGALNYRLIAQHVEYFSDDG-ISWFT-----------QPVMTTFDKDPTWSIKSDRAKLTN-D---------RMLY------------------------LYGHVEVNALTADSQLRKITTDNAQINLVTQ-----DVTSQDLV-TLYGTTFNSSNLRS- |
9 | 6mjpC | 0.09 | 0.07 | 2.62 | 0.79 | SP3 | | SRIVYVLLLFIASWSLYYLLGQEQDSKIQVAPNLELNLENISYDEQGIRNYVITSIHLDHYAKSGNTLKVYREGTLQEWEITARRGILSKDQ-VLTLYDDVLAKNLLPDSGFDTLTTSEMSIQLKSRD---------------FWADKPVELRGPQF-----ETHGQAMKGNFADHS---AELY--------------------- |
10 | 3ucpA2 | 0.08 | 0.07 | 2.65 | 0.76 | PROSPECTOR2 | | LAK-------------------ANATKLLRTEY-AYKLENGTFDVAKGELTKVKEFWVSLTAFNGTEYTMGPRPSNGTLGRSENRISVNLANLTAVPNGSKVTYTLTGIK--------------AVIGTSSVPYKQIVSIGKGFMDGKLLICANSAELDP-----TMDAAIDCSNTEAPIYEVIVGSNKASFS-ADASNVTARSI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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