Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ASQEETTQPEELTEMDFLSFEELSQFFSSAQTASLKEQFPVYLTRIGRTDVTSAEYLPDETGYPDTTTVELHFLLSDDSTLPVFYDTMTGAFSFGEDRTVLGTSGKTYEKPVVDTLPPVSSSEVEQRQEGGYADVTAPESPAP |
1 | 3imoA | 0.08 | 0.06 | 2.24 | 0.77 | SPARKS-K | | -----------HMALTVKDVNILSQYISAGNVEEIALALAGAILWRKDDT--NIKVMAHGA--DTKNVLWVTIN---GERYAFSYNHSSEKIEMRKGNIQGNTIHEFD--------NSTPLSKLVEIFKGL------------ |
2 | 5ja8A | 0.15 | 0.08 | 2.83 | 0.54 | FFAS-3D | | -------------------FEYRDEYLSDEEYRLFQAELMLNPDVIQGTGGLRKIRVASRGGS----RIIYYFLDEKRRFYLLT----------------------IYGKNEMSDL---NANQRKQLMA-------------- |
3 | 5uwaA | 0.12 | 0.09 | 3.24 | 0.26 | HHpred | | ---------VDQELLPYVQVKYAGALATPAQREAYFAAFREYLKQAYGYHGQTYQIAPEQPL-GDKTIVPIRIIDPGRPPVRLDFQWRTGNWQAYDMIAEGVSMITTKQNEWGT-----------LLRTKGIDG--------- |
4 | 5tseA | 0.12 | 0.10 | 3.48 | 0.72 | MUSTER | | ------ATPLVYKKLSLELPAK-----TDDLETQLKVYLTANVQLSNDNDAYVLRVLEYTPR--NGKLTEVLLRL----TVTFQIEDRQGNKITEPRTL---TAARSYQYDLATVN---ENQQESYLQRIVIDDANRLPKAQP |
5 | 3q7jA | 0.07 | 0.03 | 1.44 | 0.55 | CNFpred | | -----------------AEGSDLWTAIEDVSGKPVKRVMEYWIKNP---GYPVIKLKRN------GRKITMYQTRF-RWPVPVNIKKKDGVERILLED--------------------------------------------- |
6 | 2v5iA2 | 0.25 | 0.08 | 2.38 | 0.45 | HHsearch-2 | | ---------------------------------------------------ISGTVLPD-EGVLDINTMSLYLD---AGALWALIRLPDGSKTRMK----LSV---------------------------------------- |
7 | 4ixjA1 | 0.08 | 0.08 | 2.99 | 0.79 | Neff-PPAS | | DLIASFAQDPSIIPGASKGNDDFRKYLLDNKYKNGWPTIPDEFKAKYGLSKDTLYIQPYAYNPTKSDATVVVFANNKTGYTSLVYDYDEGRWYKGKNGISVAGRS----WDVDTDSVKSVKTEIHSKEGWGPLN--------- |
8 | 2v5iA2 | 0.23 | 0.07 | 2.20 | 0.42 | HHsearch | | ---------------------------------------------------ISGTVLPD-EGVLDINTMSLYLD---AGALWALIRLPDGSKTRMKL----SV---------------------------------------- |
9 | 2dawA | 0.10 | 0.10 | 3.63 | 0.59 | SP3 | | GSSGMSASVKESLQLQLLEMEMLFSMFPNQGEVNALTNIKRYLEGTREALPPKIEFVITLQIEEPKVKIDLQVTMPHSYLALQLFGRSSE--LDRHQQLLLNKGLTSYIGTFDPGELCVAIQWLQDNSASYFLNRKLVSGPSS |
10 | 2dbcA | 0.10 | 0.08 | 3.07 | 0.56 | PROSPECTOR2 | | GSSGSSGKF---GELREISGNQYVNEVTNAEKLVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDNCLPTIFVYKNGQIE-------------------------GKFIGIIECGGINLKLEELEWKEVGASDLEENSGPSSG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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