Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LKEVELYHWDNAGEKPKEALDNKVLKEAYMMEIRLLTDAGEKDPESYDTDHYLRHVLSDGIKKIQIFTETAFNEEFPAGAEVTSCFYDYPKTFVKDQQTDYTVNGGVISMIDEVNKIYKALLTIPQSGGEFRFRVVLTMESGETVERLSD |
1 | 4ei0A1 | 0.12 | 0.09 | 3.31 | 0.74 | SPARKS-K | | -------------------PVSALSND-------CIKRSLPVAPNIVGNEIEFAYAALGKLSSAQVVSSIAGAT----GTYFDP--NSYYTNSSGQDIPVSQTNGTTTVIVDTCAATLRYYYIIPERGKDVQFSFSVKASNGQVAEYKLG |
2 | 2e9gA | 0.12 | 0.09 | 3.09 | 0.49 | FFAS-3D | | ----------SSGPPPAPIPDLKVFERE-GVQLNLSFIRPPENPALLLITITATNFSEGDVTHFICQASLQLQLQAPSGNTV-------------------------PARGGLPITQLFRILNPNKAPLRLKLRLTYDH-FHQSVQEIFE |
3 | 5cagA | 0.14 | 0.13 | 4.33 | 0.29 | HHpred | | PEGVRVIFYPKNGDGRKVGGE-KVPPGRYSVVVYNYTESIRWSPDSLYVLNRLDWKLESVVKKYSFAVE--A-----KG--LEYVATV--VGSIDGLSDCYCIKPIYFEVKKGDAFFTA-FKQVKETKGAIILILKFIKTDNTVQEATID |
4 | 4mboA2 | 0.14 | 0.13 | 4.33 | 0.75 | MUSTER | | -------------NSPSVTEHTNVKTNVRSRIMKLDDERQTETYITQINPEGKEMYFASGLGNLYTIIGSDGSPVNLLNAEVK-ILKTNSKNLTDSMDQNYDSPEFEYSYTNDGSKITIDWKTNSISSTTSYVVLVKIPQSGVLYSTVSD |
5 | 4ei0A | 0.13 | 0.09 | 2.99 | 0.67 | CNFpred | | -----------------------------EIEFAYAMAIP------------------GKLSSAQVVSSI----AGATGTYFDPNSYYTNQDIPVKVCSDSQTNGTTTVIDF-CAATLRYYYIIPERGKDVQFSFSVKASNGQVAEYKLG |
6 | 1vw4V | 0.21 | 0.06 | 1.91 | 0.68 | HHsearch-2 | | ---------------------------------------------------------------------------------------------------------TRITLPRRPAKKIQLGKSRP--AIYHQFNVKMELSDGSVVIRRSQ |
7 | 3s6pA2 | 0.09 | 0.09 | 3.25 | 0.92 | Neff-PPAS | | ---------DVSEAYALHTLTFARPSSAAALAFVWAGLPQGGTAPAGTP----AWEQASSGGYLTWRHNGTTFPAGSVSYVLPEGFALERYDPNDGSWTDFASAGDTVTFRQVAVDEVVVTNNPAGGAPTFTVRVPPSNAYTNTVFRNTL |
8 | 1vw4V | 0.21 | 0.06 | 1.90 | 0.56 | HHsearch | | ---------------------------------------------------------------------------------------------------------TRITLPRRPAKKIQLGKSRP--AIYHQFNVKMELSDGSVVIRRS- |
9 | 5oacA2 | 0.08 | 0.07 | 2.93 | 0.68 | SP3 | | ------MTIKYLSSETEKLMNQTVSGIDVCFTLIGVDDDSFASGSKNDYISDTPKFLDPSNVHIKATLKRGGKDYVLFSENLALLAKYSTITQGRDQWEEGVKLAAKEMVHLVYIPFSGNTNWPAHLKDNDVLEVYVNVVRG-AYGAELD |
10 | 4mboA2 | 0.04 | 0.04 | 2.01 | 0.60 | PROSPECTOR2 | | NSPSVTE--HTNVKTNVRSRIMKLDDERQTETYITQINPEGKEMYFASGL--------GNLYTIIGSDGSPVNLLNAEVKILKTNSKNLTDSMDQNYDSPEFEDVTSQYSYTNDGSKITIDWKTNSISSTTSYVVLVKIPQSGVLYSTTN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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