Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | DRIEGNSSTFEFIKSLYGIESVTNVTDTGNVPAVTAEEMEGVLEALRQNGNITHECKSENVEGYFGDGGDRQSVKMTAEYQARTRAGAYLEEFALCVSLNFNVDKNTVYYIGTTYSSSADLFTWKGYGASLSTTAGGGNVFTAITHLYFRVSDQENCLVKVPVDFKGNYDFNTGCGTYNFAL |
1 | 3knyA | 0.10 | 0.08 | 3.09 | 0.74 | SPARKS-K | | VSEKVTPKEYELWRTSSRYEINYSFLKKD----ISEKRKKEIYDCINNICERIEKGQINKYEGFDEDGTAEYKTNGCTLYTHS-------LGPYIKAAVTYKKSDDDVTITSSSVYTGSPNDPSFSGASSVSYDKDKKL-IAASCSGTLSFKDGSR---KVEVTVQKTGFIP---------- |
2 | 6dnzB2 | 0.15 | 0.13 | 4.46 | 0.53 | FFAS-3D | | ---YCFHDTVEFWGNVYGFKEPKALVQREVECRVPTSSI----------VTTTCLAHTVNIASINNLDDKSSLNDFVVPFSVRATKDTTVNFLTFYIDARFTNPHD----PGANFVLGVRPGPWTETSVALHEPLKGGEVLSGELKVCLLNPTRGITTVEVTARTSGNVVNIETKGTYNYQ- |
3 | 4r1oA | 0.09 | 0.09 | 3.31 | 0.34 | HHpred | | DNMREVAVDKVGAQIQFGWSVNGYGDLVQYIRDVSEQKVNELLDEYEELYDIVPAGRAFTTEDLHGMEGDWKTAALVRLMKVMAKGTSFMEDYT------YHFEPGLILGA-HMLEVCPTIAAT---RPRVEVHPIGGFDGGEGAAVNASLIDLGHRLIVNEVDAVKPHMPKLPRILWKPR- |
4 | 5vmmE2 | 0.11 | 0.10 | 3.75 | 0.72 | MUSTER | | EDY-KAEKLLAPYKKAKTLERQVYELNQDKLPEKLKAEYKKKLEDTKK--ALDEQVKSAITEFQNVQPTNEKMTDLQTKYVVYESVENNEDTF-VKHPIKTGMLNG-KKYMVMETTNDDYWKDFMVEGQTISKDAKNN-----TRTIIFPYVEGKT---LYDAIVKVHVKTIDYDGQYHVRI |
5 | 4xrtA | 0.13 | 0.09 | 3.23 | 0.76 | CNFpred | | DREL--RELVDCVTDARRDLVVDFEDPL--FVAGAVDDAYTYLYEADKWPERIPHVARLVMEER----PNIQFFDMDTTT-----------SAHTTRSVRVCLPGDKIVYKQIQ---LPKLLTGHTGHWKFTPTR-EGFVLGARHTATIKPS------------------------------ |
6 | 5lvyA | 0.21 | 0.13 | 4.18 | 0.64 | HHsearch-2 | | -----------------------------------------------------NSCSLSSSPD-------------PVTYTIPTDKGDKYINFKLDVPDP-RCKGGTVYFWGADTRDGKLVMKKGQDKYTLMTTYGGAQQQLGGGYGYYHVSQKTPPQTISGVVSKN-VGYK--PGQYTVEL |
7 | 3knyA | 0.08 | 0.07 | 2.80 | 0.85 | Neff-PPAS | | ---KVTPKEYELWRTSSRYEINYSFLKKD----ISEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTAEYKTNGCTLYTHSL---GPYIKAAVTYKKSDDDVTITSSSVYTGSPGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGS---RKVEVTVQKTGFIP---------- |
8 | 5v3wA1 | 0.15 | 0.05 | 1.85 | 0.42 | HHsearch | | -TKEEIDRYAAFAEKTFNVTIIPYEQ-LEELDD--EGQVRFVLDAVSQSGVQIPEHQRTS---Y-LDN---RA----------------IDTA----------------------------------------------------------------------------------------- |
9 | 5vmmE2 | 0.09 | 0.09 | 3.31 | 0.60 | SP3 | | -EDYKAEKLLAPYKKAKTLERQVYELNQDKLPEKLKAEYKKKLEDTKKALDEQVKSAITEFQNVQPTNEKMTDLQDT-KYVVYENNESMMDTF-VKHPIKTGMLNG-KKYMVMETTNDDYWKDFMVEGVRTISKDAKNN----TRTIIFPYVEGKT---LYDAIVKVHVKTIDYDGQYHVRI |
10 | 3g3lA2 | 0.08 | 0.07 | 2.79 | 0.71 | PROSPECTOR2 | | VIPPVVPKVADKAVEVAKPSESTVTDLAGTTAT---PEEKKALDETLEAGGKVGETTPEVLA-----------------------DGSILAITPVKFTNPIQDAPAVPYFYNEGCELTGDVKEVAVQKIGYTRISVLNGYSILGYTIKGQLVSKKLTFLISGKYYEGIVSYQKSVIYPNYYS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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