Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VKTYYMNENVPYEDDYFRRADNILNGYSATVLGYEIIPYDEYAEKYNIDLPEIETDEAGNTIYRPEYVYDVEIKFVNTDNEDGTIDMFDTLLVNGKELMLRADEYLWDEMYPQLAGSYSFRLRTNTEKVFHIPFVVESVYSKRYPIEKIKKQNMSIVISQYPEKKV |
1 | 4lesA | 0.15 | 0.11 | 3.87 | 1.16 | SPARKS-K | | EKEYAVNKDFHTPK------------FDVTVKRVVERD---------KSIGFQKPEDG-------HVFIVVEAEGKNITSEPKLAFLPSVDLVDENDNAYQSDAASSYDVEKGETSSITKELKPGEVKRQNKVYVINK--------EKFDTGKWYVVVNNEYKEQI |
2 | 4lesA | 0.14 | 0.11 | 3.89 | 1.04 | FFAS-3D | | -KEYAVNKDFHTP------------KFDVTVKRVVERD------------KVGKESIGFQKPEDGHVFIVVEAEGKNITSEPKLAFLPSVDLVDENDNAYQSDVWAASSYDVEKGETSSIELKPGEVKRQNKVYVINK--------EKFDTGKWYVVVNNEYKEQI |
3 | 5bxgA | 0.07 | 0.05 | 2.21 | 0.77 | HHpred | | DKEVVIGEKI-IS------------DKEITINNIEFSYD------VLPKKESYPAE-------SGKVYIDIAADIKNTQKQELNCSLLTIEANYNDGYKYSSQ-TI--VEDET--TGFISSIDPLETKGVRFIIDCPDVKT--------SDKPVILSFTFDGN--- |
4 | 4lesA | 0.18 | 0.14 | 4.70 | 1.18 | MUSTER | | EKEYAVNKDFHTPK------------FDVTVKRVVERD------KVGKESIGFQKPEDGH------VFIVVEAEGKNITSEPKLAFLPSVDLVDENDNAYQSDVWAASSYDKGETSSITKELKPGEVKRQNKVYVI--------NKEKFDTGKWYVVVN--NEYKE |
5 | 4lesA | 0.15 | 0.12 | 4.04 | 1.43 | CNFpred | | EKEYAVNKDFHT------------PKFDVTVKRVVERDK--------------VGKESIGFQK-GHVFIVVEAEGKNITSEPMKLFLPSVDLVDENDNAYQSDVWAASSYDVEETSSITKELKPGEVKRQNKVYVINK--------EKFDTGKWYVVVNNEYKEQI |
6 | 4r4gA1 | 0.14 | 0.10 | 3.52 | 1.44 | HHsearch-2 | | ----ESETEKSSD------------IAQVKIKDVSYTLPSKY--------DK-STSD-------DQLVLKVNVAVKNTGKDPLNVD-SDFTLYQ-GD-TKSDT-DPEDY-SE---KLQGSTINADKSVEGNLFFVVDKNYTPES-YGDKKPKSVTFKIDGKTADKL |
7 | 4lesA | 0.13 | 0.11 | 3.73 | 1.39 | Neff-PPAS | | EKEYAVNKDFHTPK------------FDVTVKRVVERD------------KVGKESIGFQKPEDGHVFIVVEAEGKNITSEPKLAFLPSVDLVDENDNAYQSDVWAASSYDVEKGETITKELKPGEVKRQNKVYVIN--------KEKFDTGKWYVVVNNEYKEQI |
8 | 4r4gA1 | 0.14 | 0.10 | 3.51 | 1.61 | HHsearch | | ----ESETEKSSD------------IAQVKIKDVSYTLPSKY----DK-----STSD-------DQLVLKVNVAVKNTGKDPLNVD-SDFTLYQ-GD-TKSDT-DPEDY-SE---KLQGSTINADKSVEGNLFFVVDKNYTPES-YGDKKPKSVTFKIDGKTADK- |
9 | 4lesA | 0.16 | 0.13 | 4.22 | 0.91 | PROSPECTOR2 | | SKEYAVNKDFHTP------------KFDVTVKRVVERD------------KVGKESIGFQKPEDGHVFIVVEAEGKNITSEPKLAFLPSVDLVDENDNAYQSDVWAASDVEKGETSSITKELKPGEVKRQNKVYVINK--------EKFDTGKWYVVVNNYKEQIK |
10 | 4lesA | 0.15 | 0.10 | 3.25 | 0.70 | SAM | | -KEYAVNKDFHTP------------KFDVTVKRVVERDKV--GKESIGK-----PED--------HVFIVVEAEGKNITSEPKLAFLPSVDLVDENDNAYQSDVWAASYDV-GETSSITKELKPGEVKRQNKVYVIN----------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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