Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | QKNIDKMAAELEKRDDVAINSVTKRDPKTRKVVKVVKSFSLKDENIGARLIEAFEKDEEYAETAIKDMPKGRGKAQKANFTFIYKTDNEKRTYTLNVKESGSVSMTVI |
1 | 6expA | 0.10 | 0.07 | 2.78 | 0.78 | SPARKS-K | | YKELEKMLDVIFEN------------SEIKEDLFFDPEVEIS------------KQEFEDLVKNADPLQKVVGDNYITETFEWWEFENQYLEFELDYYVDEKIFVLEM |
2 | 1y4oA | 0.10 | 0.08 | 3.09 | 0.62 | FFAS-3D | | EAEVEETLKRLQSQKGVQGIIVVNTE------GIPIKS--TMDNPTTTQYANLMHNFILKARSTVREIDPQNDLT-----FLRIRSKKNEIMVA----PDKDYFLIVI |
3 | 3fyfB | 0.08 | 0.07 | 2.92 | 0.27 | HHpred | | -VSYVQAINALKNGS-FVLEADNV-VFRNGIMRFVSNYVEVNDGAFTNFVYGGVTVQGNNGISMRQD-KDGN-----VYYNYGINGIAVSATVSIVLTGTNQASVTIN |
4 | 5xbjA | 0.11 | 0.10 | 3.69 | 0.67 | MUSTER | | GLKGDIPLVNYDRTIQPGSFDIVIYDDKGD--KKLTKTITIDVNTTMNDIMRQINA----NTDDNDNKNSNDDVDDHINASFSYDAKTGDGLFQINAKSGFKVAIEDK |
5 | 3f44A | 0.12 | 0.09 | 3.30 | 0.68 | CNFpred | | ADDFVETVNKIATKKVIDLHPEVITTK--DNFVMRLIKVEVKD-ADAEKFSHAVKKE---MTTSMASE------PGMEIMMSGTNIDNPNEWYFIEVY---------- |
6 | 3jacA | 0.12 | 0.12 | 4.25 | 0.38 | HHsearch-2 | | PPSRAQMKQELYNTADLRFTWNFQRDLAKGTVEYEKHTLELAPNTARRQLAQLLEGRPDQSVVIPHRAPNGEAEEDYLGVRIQLRREDFLEWWVIELQDCNLLPMVIF |
7 | 3k7cA | 0.10 | 0.09 | 3.45 | 0.72 | Neff-PPAS | | EDLAKNFTKDLYSGDTKSVSYIDLSEAKS---DEEKTFVSDKITQVVAENAAKAKRGGVKDIQIEEKTINK--DSAKIRVLVLFNNDNNQSSNVFLAKKDRKWLVLLK |
8 | 3fyfB | 0.08 | 0.07 | 2.92 | 0.40 | HHsearch | | SVSYVQAINALKNGS-FVLEADNV-VFRNGIMRFVSNYVEVNDGAFTNFVYGGVTVQGNNGISMRQD-KDGN-----VYYNYGINGIAVSATVSIVLTGTNQASVTI- |
9 | 2c1gA1 | 0.07 | 0.06 | 2.71 | 0.68 | SP3 | | EQKIESLKKEKDDQLSEGNQKEHFRQGQAEVIAYYPLQGEKVISSVRELINQDVKDESKDNLVFYYTEQEESGLKGVVNRNVTKQITEKTSLGKVHLTEDGQPF---- |
10 | 2c1gA1 | 0.09 | 0.08 | 3.21 | 0.51 | PROSPECTOR2 | | FEQIESLKKEKDDQLSEGNQKEHFRQGQAEVIAYYPLQGEKVISSVRELINQDVKDKLESKDYTEQEESGLKGVVNRNVTKQIYDLVAKTSLGKVHLTEDGQ----PF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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