>PF16394 (320 residues) KIFDEEGVEINELKVGYQHFSKFSVQANFRFAATNLPGWVELEGGSLVGPVNQKVSGGLK IIEDDNREKYPVPASDKNVITFSDEEGKAFYSFNVSYDGMTPGVLEMTLPSSNKYDWAVS LDGKTFTQSAGGVAGTGGSTTTLKNRVPFTVKTLNDDYEVVFVEKGSNNNDLYIMDASYN EWMRCEREGGKATLIVDEYTPASYEPAERVGYVLVFSRAQYEDIKDNLEATIIDGEDLVY KYEQSNLVLQFTQKETKGGGDELAITAVDGQTYNPIDCTSYTGGDADYFKSEYGVTGIFE IKQPASVATVAKMPFNWSNS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KIFDEEGVEINELKVGYQHFSKFSVQANFRFAATNLPGWVELEGGSLVGPVNQKVSGGLKIIEDDNREKYPVPASDKNVITFSDEEGKAFYSFNVSYDGMTPGVLEMTLPSSNKYDWAVSLDGKTFTQSAGGVAGTGGSTTTLKNRVPFTVKTLNDDYEVVFVEKGSNNNDLYIMDASYNEWMRCEREGGKATLIVDEYTPASYEPAERVGYVLVFSRAQYEDIKDNLEATIIDGEDLVYKYEQSNLVLQFTQKETKGGGDELAITAVDGQTYNPIDCTSYTGGDADYFKSEYGVTGIFEIKQPASVATVAKMPFNWSNS | |||||||||||||||||||
1 | 3jx8A | 0.12 | 0.08 | 2.78 | 1.21 | CNFpred | --------DYDEITFVG--SADFEYEQSPYLSVTIDFDYLVTEV----------EGGTLKIYPKSINNSYDLRP-TVYKIKSNSK---ELKELNTVG----SGSFIISKPTVNRMEINMAG-SGNVELRG----------PVKGYKLECNMAGS-GNIIAKDIQLD---NLSCSLAS--SGEIEVIGTVDRASFNVAG-------SGEIKAFDCQARKAECNIA-------------------SGEISVYATQ--------ILDANIVGS---GEIHYKGD---------------PEISKSIM-GSGSINKVK------ | |||||||||||||
2 | 4uieA | 0.11 | 0.10 | 3.65 | 1.01 | Neff-PPAS | -------ADLIELDAADNGDALAKLLANLDIKDQNGNPMVDSAATPNTNEKLQALKSVLSGIVSSDSNVDNLKDDASISGLAVKKAGTVTLTLVFNEDSIAPIAITVKAPAATQDGVTVTG-LDLVPGVTGVGKTKFTATDKIKSGHKLYYAVDDSAVPAPAVGTTRNSTKFANEITVGTTEVAANAGQIITVIEVDS---------SDRVVGYKTFTVEAADLSVAADKTGFTATVTPTGGNQVTGKTLLAVSDLANGHKLYAAAAGSSAAAAPVKGIAYTDTTVRTTYGTEVTSGTVEVDAQDGQHISIIEVDENGKV | |||||||||||||
3 | 4aq1A | 0.13 | 0.12 | 4.33 | 0.84 | SPARKS-K | NFAIDNGLTVTKATLSDKKSVEVVVNQEYTITATG----IKNLKGETA----KELTGKFVWSVQDAVNNSSLKVGEESGLTVKDQDGKAKVELTSSNTNIVVVSAKVTAVKPGTADVTAKVDGVVLTNTFKVTVTEVPVQV---QNQGFTLVMFAGETKTVAMYDTKNGDPEATVRSLNPIIATAAINGSELLVTANAGQSGKKDNTKRTFTVDVKKEPVLQDIKDATSDEAVGGGEVEGVNQKTIKVSAVDQYGKEKFGTKGKVTVTTNTEG--LVIKNVNSDNTIDFDSGNSATDQFVVVATKDKVEVKYFKNASDTT | |||||||||||||
4 | 2icfB3 | 0.08 | 0.07 | 2.93 | 0.61 | FFAS-3D | -------------GICVADPFEVTVMQDFFIDL-RLPEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTIPPKSSLSVPYVIVPLKTGLQEVEVKAAVYHHKSLKVVPEGIRMNKEDIPPADLSDQVPDTESETRILLQGTELNLDVSLQLPSRSSKITHRIHWESASLLSVVTMYHDLKVTIKPAPETKNGDQDATMSILDISTDDLKQLANGVDRYISKYELDKAFSDRNTLIIYLDK-VSHSEDDCLAFKVHQYFNVELIQPGAVK---------------VYAYYNLEESCTRFYHPEKEDGK | |||||||||||||
5 | 4zmhA | 0.11 | 0.08 | 2.82 | 0.43 | HHpred | ------GKQTKILTVFNK------GVKPLKFSVSSGAAWLKVS--ASSGEITHQEQIQVSI--D--WAKLPLGI-HESNVTIKGPSWAANIKVTANKPAPLDGYISFDAA---ATTHSKAVDGFEWQE-IPAHGRTHSSSVANTAPQHYSITLLTGEVTVEGLFA--PT-----WP-I--------HPERGLRYAIAF-----DDQPPQIVD--VLAGN-----SHKVWQ---------ESVRT-GVRRASSKHTLTAGTHT-KVWAIDPAV--TVQKIIDTGELKPSYLG----------------------------- | |||||||||||||
6 | 5az4A | 0.10 | 0.10 | 3.60 | 0.82 | MUSTER | RAEDENDTGTTQFYTTSKNSVEVTEKGDAGSLFNAKGQGLNLRDGQGIWVSYADATYST----NKVGVNAFDPNLQQNQTAAFWGTANQKVNLDITLNGVRIQNADIQSIDDTAPTDTRDGTGVKAVKNKDGSGDNADGTTDNMKNINLVVANTNTAGELWNAVWNNNNQTFTFNNGQAGTPTINKNGSSLWTATNITFTPQPPQAATNVQLTGGLNAQIITAHKYIYSSNPVDIGPMYNPDGGPAFQPGANATTRPTEPGSAAYWDAVNGGLLNTNVRTFRSGTFAAADINQNIDGHFAISNANEQSTVPPNAINGVGN | |||||||||||||
7 | 3lycA | 0.10 | 0.07 | 2.53 | 1.17 | CNFpred | --------EYDCLELEG-GGMVVNYTQSD------APEGLEIKT-KYEFNV---ENHKLKIRPKKEFRKHTNFRPTEFMVTANSR-LAAAGSTHVNINSLQAEEFEAGLAG--SGIIQFH---DTASFT----------NLKIEIAGSGDFVGHKVYCEELNGDMAG--SNTIVLGGT-VGIAEFSI-AGSGTVRAFDCT-------MDELECKIAGS--------------------------GDIEAFVVN--------KIKAEIAGS---GSVKYKGDP--------------QDIQKKVM-GSGKIEKVE------ | |||||||||||||
8 | 3zmrA1 | 0.13 | 0.03 | 1.19 | 0.84 | HHsearch-2 | LEVAQEY---RNLEFDARSRQTIQIDGPAEWHISTSESWCKSS--HTIGE-G-K---------------------------------------------------------------------------------------------------------------------------------------QYVNITVEAN----DTQKERTATVTVSAS-------G----------------A-PDIIINVKQS------------------------------------------------------------------ | |||||||||||||
9 | 4p99A | 0.09 | 0.08 | 3.25 | 1.00 | Neff-PPAS | ---GGDIAEGDTVTLEINETYTTTVDANGEWSVDVAGSDLAADTATSSDAAGNTVDTTGSSTHTTAGTVTVNAITSDDVINASEAAGTVAVSGTATGGDIAEGDTVTLEINGETYTTTVDANG-EWSVDVAGSDLAADT------AFDAVVTSSDDTTGSSTHTVDTEATAGTVTVNAITSDDVINASEAAGTVAVSGTATGGDIAEGDTVTLEINGETYTTTVDANGEWSVDVAGSDLAADTAFDAVVTSSDAAGNTVDTTGSSTHTVDTEATAGTVTVNAITSDDVINASEAGTVAVSGTATGGTVTLEINGETYTTT | |||||||||||||
10 | 3zmrA1 | 0.11 | 0.03 | 1.02 | 0.80 | HHsearch | -SLE-VAQEYRNLEFDARSRQTIQIDGPAEWHISTSESWCKSS--HTIGE-G-KQYVNITVEAN--DTQKE----RTATVTVSASGA-PDIIINVKQS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |