Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MKNIFQSLSIATLLGLFVPFISSCSDDEEVFNEWNATYVSLQRNDYLSGNVKKFNLTHDANGIGGDEIKMAFTVKTQK |
1 | 6ekvA | 0.12 | 0.12 | 4.10 | 0.87 | SPARKS-K | | FGISFPLFIEHFLKQALLSSQFISVDDNTLTITNNKQ-IIFGKVENSDGKNVDSSLGKLKLSLQNNLIVLELFDLTWE |
2 | 2pmvA1 | 0.24 | 0.10 | 3.19 | 0.33 | FFAS-3D | | -KLLTYQLMIGHLGLTIMALTSSCRDPGDKVSIL-------------------------------------------- |
3 | 1pfsA | 0.14 | 0.09 | 3.08 | 0.19 | HHpred | | -------------------QGTS-AK----GNPYTEGFLHLDQESVIPAG--SYQVPYR-INVNNGRPELAFDFKAMK |
4 | 5j6qA6 | 0.14 | 0.12 | 3.96 | 0.90 | MUSTER | | IENYKTAQEIVDAVNAYNATLA-----EDSDNKLTATIKSTVEVKRAKDSANVITLNV-------GDQHLDFSKVITS |
5 | 6ekvA | 0.11 | 0.10 | 3.72 | 0.69 | CNFpred | | ----FPLFIEHFLKQALLSSQFISVDDIVADLTITNNQIIFGKVENSDGKNVDSSLKKLKLSLQNNLIVLELFDLTWE |
6 | 2xwxA2 | 0.20 | 0.08 | 2.46 | 0.39 | HHsearch-2 | | -----------------------------------------------QPEY-SLTVSGLAYEIGEQPIQLDLTLEAQG |
7 | 5j6qA6 | 0.10 | 0.09 | 3.31 | 0.92 | Neff-PPAS | | KIENYKTAQEIVDAVNAYNATLAEDSDNKLTATIKSTNTVEVKRAKDSANVITLNV---------GDQHLDFSKVITS |
8 | 3j46n | 0.22 | 0.19 | 6.05 | 0.50 | HHsearch | | AKKIW-L----ALAGLVLAFSASCAQYEDGSSERQHTFALHQRISDYHSLPEKMTKYLQEQKL--AV---AAVAAQA- |
9 | 4yptA1 | 0.08 | 0.08 | 3.00 | 0.86 | SP3 | | -----IQLDDDARVFVQANMDCLPTDWRLVNKFDSVDGVRTIKYFECPGGIFVSSQGKKFGYVQNG-SFKEASVSQIR |
10 | 5ts4A | 0.13 | 0.13 | 4.45 | 0.44 | PROSPECTOR2 | | MSEEAKIAIELFKEAMKERFKEMCSPDEECKKFAEEMKKTEVRVERYRSDGDRFEIEEIRMRKVNGEFRI-EEMRLHG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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