Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MKSNRLFLRRRTRGLLFATLLFLLSSCTIGYHEDESFESDVKNATLESPQLENVKVELDATGENATIEWPVVHGAEGYEFSWYVVDDPENPIAVVEGEFIDGCSVELEVEEDTKYKFLIKTIGNKQFNNKDAEKACEISFSTLLETYASIPSGVDLTQWFIDNPLPETDMEPNEDGTLKELAYELEAN |
1 | 5ak1A2 | 0.19 | 0.08 | 2.57 | 1.02 | FFAS-3D | | ------------------------------------------------PT--GLSAVLDSSGNTANLTWNAAPGANSYNVKRSTKSGGPY---TTIATNITSTNYTDGVATGTKYYYVVSAVSNGVETLNS--------------------------------------------------------- |
2 | 1ueyA | 0.05 | 0.03 | 1.51 | 1.17 | Neff-PPAS | | ---------------------------------SSGSSGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPSSG--------------------------------- |
3 | 6gvkA1 | 0.11 | 0.06 | 2.13 | 0.91 | SPARKS-K | | ---------------------------------------VPDT-----PTRLVFSALGP---TSLRVSWQE-PPLQGYSVEYQLLNGGELHRLNIPNP--AQTSVVVELLPNHSYVFRVRAQSQEGWREREGVITIESQVPLCPLPGSAFTLS----------------------------------- |
4 | 4gh7B1 | 0.14 | 0.06 | 2.19 | 1.01 | FFAS-3D | | -----------------------------------------------PPT--NLHLEANPDTGVLTVSWERSTTITGYRITTTPTNGQQGN-SLEEVVHADQSSCTFDLSPGLEYNVSVYTVKDDKESVPISDTIIP--------------------------------------------------- |
5 | 2geeA | 0.10 | 0.07 | 2.77 | 0.57 | HHpred | | ----------------------------------------GSHMEVPQPT--DLSFVDI-TDSSIGLRWTPLNTIIGYRITVVAAGEGIPIFE--DFVDSSVGYYTVTLEPGIDYDISVYTVKNGGESTPTTLTPPPTDLRNIGPMRVTWAPPPDLTNFLVRYSPVKNEEVAELSISPSDNAVVLLPG |
6 | 1zlgA | 0.10 | 0.10 | 3.59 | 0.87 | MUSTER | | YWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTETVNRYHVRWFPEACAHNRTTGSESGMTHENYIILQLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFNLY |
7 | 4gh7B | 0.14 | 0.10 | 3.25 | 0.87 | CNFpred | | ---------------------------------------------LSPPTNLHLEANPD--TGVLTVSWERSTTITGYRITTTPTNG-QQGNSLEEVVHADQSSCTFDNLPGLEYNVSVYTVKD----DKESVPISDTIIPEVPQLDLSFVDISIGLRWTPLN-----------SSTIIGYRITVVAA |
8 | 3a0oA1 | 0.09 | 0.05 | 2.02 | 0.68 | HHsearch-2 | | ----------------------------QTLLDEPR---PGSLTIGYEPSEEAQ-P----TENPPRFSWLPDIDDARYVLRISTDPGFTDKKL--VFEDLAWNFFTPELPDG-HYHWCYALWDQKTAH--SNWSTVRSFEISEALPKTPLP------------------------------------- |
9 | 1x4zA | 0.13 | 0.08 | 2.77 | 1.08 | Neff-PPAS | | --------------------------------SSGSSGSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPRGNGGSFRVEYKKLKKVGDWILATSAIPPSRLSVEITLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGSGPSSG----------------------------------------- |
10 | 3a0oA1 | 0.09 | 0.05 | 2.02 | 0.94 | HHsearch | | ---------------------------QT-LLDEP---RPGSLTIGYEPSEEAQ-P----TENPPRFSWLPDIDDARYVLRISTDPGFTDKKL--VFEDLAWNFFTPELPDG-HYHWCYALWDQKTAHS--NWSTVRSFEISEALPKTPLP------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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