Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LYKDYTHVVMQKACPFDIHNFSGWCMVTSTFYSQYLNNVTNRLIKTEVVEGEENTVLLKDVYYKGYDLKLKFKTGNLLEPKVEMDDQIAGETGEAFGTIYGDGKLRISQPSLYTSYYNTCQNYVLQYVNMSVNKKDGSLYGNVGTFITMFEWVSDAEAEKLKEQ |
1 | 4aq1A | 0.17 | 0.15 | 5.02 | 0.71 | SPARKS-K | | RDKKSVEVVVNK--PFTRN---QEYTITATGIKNLKGETAELTGKFVWSVQDAVTVALNNSLKVGEESGLTVKDQDVVGAKVELTSS----NTNIVVVSSGEVSAKVTAVKPGTADVTAKGVVLTNTFKVTVTEVPVQVQ-NQG-----FTLVAPQNTVAFNKA |
2 | 5vx6A | 0.07 | 0.06 | 2.48 | 0.58 | FFAS-3D | | --GENVLLEYIE-------------------------ENELKKAKSKAVSIENNELLIAYPLHNDMEVTVEFVGKDEVPYRFISREKMKRIQRRQYVRTDAVLDVQIQPEEEIRTLSNISAGGIAVRLIIRLPEEEHTRQIETEKRKMTLEYIAAGDQQALLQ- |
3 | 5fq3A2 | 0.10 | 0.07 | 2.46 | 0.26 | HHpred | | ------------NTA--SPLKSGIYTVAEKRTAV-VAFS---GYEIVIFQMEPGIFYISDFLGYGMVGKFELN---D-DNTITPLESYVA----GW----GDSMD-----QMTNTLLDPATGTLKWTVAY--A-G-----Q--LSFDIIVK------------- |
4 | 4aq1A | 0.13 | 0.13 | 4.42 | 0.66 | MUSTER | | LSRDKKSVEVVVNKPFTRN---QEYTITATGIKNLKGETAELTGKFVWSVQDAVTVALNNSLKVGEESGLTVKDKDVVGAKVELT-SSNTNIVVVSSGEVSVSAAKVTAVKPGTADVTA-GVVLTNTFKVTVTE-VPVQVQNQGFTLVDNLSNAPQNTVAFNKA |
5 | 2eabA | 0.07 | 0.06 | 2.49 | 1.05 | CNFpred | | ------WGDIYLDYGFN-DTTVTEYRRDLNLS--------KGKADVTFKHD-GVTYTREYFASNDNVMVARLTASKAGKLNFNVSMPTNT-NYSKTGET--GDTLTVKG------ALGNNGLLYNSQIKVVLDNGEGTLSEKVSDAKAVTLYIAAATDYKQKYP |
6 | 4qniA2 | 0.15 | 0.10 | 3.51 | 0.41 | HHsearch-2 | | ------------------NDYSGDYSGTGINKDGDESIT---KSSIRGYVIDEQTIFTYGIVDRKYKIKFAFNGET--NGSVTIS---------CDNAE----EIGFELNKDVTPSFRISSSYVIINVDYYFNYIEIIVKGTLTLSRDIIEW------------ |
7 | 3ie5B | 0.11 | 0.10 | 3.54 | 0.82 | Neff-PPAS | | ---AAYTIVKEEESPIAPHRL--FKALVLERHQVLVKAQPHVFKSGEIIEGDVGTVTKITFVDGHTYMLHKFDEIDAANFYCKYTLFEGDVLRDNIEKVVYEVKLEAVGG----------GSKGKITVTYHPKPGCTVNEEEVKIGEKKAYEFYKQVEEYLAAN |
8 | 3k8kA1 | 0.15 | 0.08 | 2.68 | 0.55 | HHsearch | | ------------------------------------------------------------TAAVKGLLKFTLDWSNAPSPILVVSTGTKADEDNDTGTD-NAKYLYY-GEDICKKFYDKGNNIYELTVDFE---------STWGL---LIRTSNASFWPKLAL- |
9 | 1hr6D | 0.13 | 0.13 | 4.43 | 0.75 | SP3 | | NYKGD-RMVLAGAGAVDHEKLV---QYAQKYFGHVPKSESPVPLGSPRGPLCRGERFIKENTLPTTHIAIALEWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAANSYMSFSTSYADSGLWGMYIVTDSNEHNVRLIVNEILKEWKRISDAEVNRAKAQ |
10 | 2vbkA4 | 0.07 | 0.06 | 2.57 | 0.62 | PROSPECTOR2 | | CIGFKNAVYVLDYCGSTIENVNGGFSFSNSWIAADADGTEQFTGIYFRTPTSTQGVHINTANKNTAANNQSIAIEQSAIFVFVSGCTLTGDEWAVNIVDINECVSFDKCIFNKPLRYLRSGGVSVTDCYLAGITEVQKPEGRYNTYRGCSG------------V |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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