>PF16292 (302 residues) PLRIRHLAALYGPNIYRPQPGVVLRVGAAADYSDRLRTALKGGALAIGLVIAQLHVEAKP DNDDMLMSAFFTTPEPAIGAELCRYVVDGINAELGHDESWDPDEPLLALRDRRQAQALPV AALQLMANARHRDIPTTILDDGRLLIGQGERGWIVAPADLRAAPDLQPPWSRLGRILIIA VTGERYRQQAIAEQAARHQGIILDQANRASVITALADPACTALIVGFDTDSLIREGLPFD RCDLAIITDRAGSRPPTAADDDEWLRALGLPMLCSVAPTLINLTDPALHPLLSYAPNGVI GW |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PLRIRHLAALYGPNIYRPQPGVVLRVGAAADYSDRLRTALKGGALAIGLVIAQLHVEAKPDNDDMLMSAFFTTPEPAIGAELCRYVVDGINAELGHDESWDPDEPLLALRDRRQAQALPVAALQLMANARHRDIPTTILDDGRLLIGQGERGWIVAPADLRAAPDLQPPWSRLGRILIIAVTGERYRQQAIAEQAARHQGIILDQANRASVITALADPACTALIVGFDTDSLIREGLPFDRCDLAIITDRAGSRPPTAADDDEWLRALGLPMLCSVAPTLINLTDPALHPLLSYAPNGVIGW | |||||||||||||||||||
1 | 4c12A | 0.09 | 0.07 | 2.61 | 1.17 | SPARKS-K | ------------------------------------------------MDASTLFKKVVLGSLEQQID-DITTDSRTAREGSIFVA-------SVGYTV-------DSHKFCQNVADQG-CKLVVVNKEQSLNVTQVVVPDTLRVASILAHTLY---------------DYPSHQLVTFGVTGTNGKTSIATMIHLIQRKLYLGTNTTPETVSLTKKAGAESMTLEVSSHGLVLGRLRGVEFDVAIFSNLTQDHLDFHGTMEAYGHAS-LLFSQLGEDVVLNNDDSFSEYLRTVTPYEVFSY | |||||||||||||
2 | 2wtzB3 | 0.12 | 0.05 | 1.77 | 1.53 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------HPSERLTVIGITGTSGKTTTTYLVEAGLRLTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGAFTNLSHLDFHPSMADYFEAASLFDPDALRARTAVVCIDDDAGRAMAARAADAI--- | |||||||||||||
3 | 2wtzB | 0.12 | 0.09 | 3.25 | 2.62 | HHpred | --------------------------------LAALADQVGAALAEQRAVTEDRTVRAQDV-SPGDLFAALTGSTTHGARH-VGD------AIARGAVAVLTDPAGVA----------------E-IA-GRAAVPVLVHPAPRGVLGGLAATVYGH---------------PSERLTVIGITGTSGKTTTTYLVEAGLAGRRVGPSALTAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGAFTNLSRDHLDFHPSMADYFEA-ASLFDPDSALRTVCIDDDAGRAMAARAA-DAITV | |||||||||||||
4 | 5vvwA | 0.13 | 0.09 | 3.00 | 0.74 | MUSTER | ---------------------------------------------------------------HRRIHFV-----GAGMCGIAEVLLNLYEVSGSDLKASAVTERLEKFAENADGADVINRANPEVASALERRIPVVPR---AEMLAELMRYR-----------------------HGIAVAGTHGKTTTTSLIASVFAATFVIGGRLNAAGTNAQLGASRYLVAEADES---DASFLHLQPMVAVVTNIDADHMATYGDFNKLKKTFVEFLHNLPFYGVMCVDDPVVREILPQIARPTVTY | |||||||||||||
5 | 3lk7A | 0.12 | 0.09 | 3.16 | 1.23 | CNFpred | -------------------KVLVLGLA---RSGEAAARLLAKL----------------------GAIVTVNDGKPDENPTAQSLLEEGIKVVC----GSHPLELLDDFCYMIKNP-GIPYNNPMVKKALEKQIPVLT------EVELAYLVS---------------------ESQLIGITGSNGKTTTTTMIAEVLNQRGLLAGNIFPASEVVQANDKDTLVMELSSFQLMG--VKEFRPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQMSDFLVLNFNQGISKELAKTTKATIVPF | |||||||||||||
6 | 3zl8A | 0.09 | 0.06 | 2.36 | 1.14 | HHsearch-2 | --------------------------------------------------MKDLLTNSKEV-REGDVFVAVK-----------------------G-KRFDGHDF------IDEALRNG-AYAIIAERKTVNSDRIFLVESSVDTLAKLAREKL-----------------GNFSGTVVGVTGSSGKTTTKEILYNLLKRSFKTPGNMNGLPSILNYKGEEILVLEMAAPGDIAHLCKIAPPDVAVLLNVGSAHLEFFGTRERIMETKMEIIKHSKENAITLFDDPDLRKEVPR-YRN-TLF | |||||||||||||
7 | 5vvwA | 0.14 | 0.09 | 3.07 | 0.91 | Neff-PPAS | --------------------------------------------------------------------------GAGMCGIAEVLLNLGYEVSGSDLKASAVTERLEKFGAQIFIGHQANRANPEVASALERRIPVVPRAEMLAELMRYR--------------------------HGIAVAGTHGKTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTASRYLVAEAD---ESDASFLHLQPMVAVVTNIDADHYGGDFNKLKKTFVEFLHNLPFYGLAVMCVDDPVVREILPQIARPTVTY | |||||||||||||
8 | 5vvwA | 0.14 | 0.10 | 3.41 | 1.67 | HHsearch | -----------------HRRIHFVGIGGA-GM--------CG----IAEVLL----------NL-GYEVSGSDLKASAVT-------ERLEKGAQG---HQAE-NADGADVLVVSSAIN-RANPEVASALERRIPVVPRAEMLAEL--------------------------MRYRHGIAVAGTHGKTTTTSLIASVFGGLFVIGGRLNAAGTNAQLGASRYLVAEADES---DASFLHLQPMVAVVTNIDADHMATYGDFNKLKKTFVEFLHNLPFYGLMCVDDPVVREILPQIARPTVT- | |||||||||||||
9 | 5vvwA | 0.14 | 0.10 | 3.50 | 1.38 | PROSPECTOR2 | HRRI----HFVGAGM-----------------------------CGIAEVLLN---------LGYEVSGSDLKASAVT---------ERLEKFGAQIFIGHQAENADGADVLVVSSAINR-ANPEVASALERRIPVVPRAEMLAELMRY--------------------------RHGIAVAGTHGKTTTTSLIASVLDPTFVIGGRLNAAGTNAQLGASRYLVAEADESD---ASFLHLQPMVAVVTNIDADHMATYGDFNKLKKTFVEFLHNLPFYGLMCVDDPVVREILPQIARPTVTY | |||||||||||||
10 | 4qdiA | 0.14 | 0.08 | 2.84 | 1.92 | SAM | ------------------------------------------------------------------------------------------------------GERFDAHNFVAQVVANG-CQVAIVERPIDAEIAQLVVADTRLALGQLGAYRR-----------------EQNALKVIALTGSSGKTTTKEMLGSILSRLLITRGNLNGVMMLLERKEHQYAVMELGHQGEIDYTSKIVQPHVAGILNIGTAHLGEFGGRDGICRAKSEIYRHILPQGVVPQQDDFTAEIREAASHQIMSF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |