Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VILDTNIIFSDFHLKGAKIKNLCESVKSTGDSIHIPAVVVDESINKYKEKAQECKSKIDRGISDFKRLTGKDIGADPCSDEFILKETEEYVEKFKKRLQELGIKIIPYPSTPHQELVKRDLSRKKPFQETGKGYRDALIWESVKNICEKYLYSSEIPKIIFVNKNHKDF |
1 | 4xgqA | 0.12 | 0.08 | 2.95 | 1.40 | FFAS-3D | | MVIDTSALVAMLS-DEPDAERFEAAVEADH-IRLMSTASYLETALVIEARFGE-----------------------------------PGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKIS-----------GQPLLFKG-EDF |
2 | 4xgqA | 0.12 | 0.08 | 2.95 | 1.28 | HHsearch-2 | | MVIDTSALVAMLSDE-PDAERFEAAVEAD-HIRLMSTASYLETALVIEARFGE-----------------------------------PGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKIS-----------GQPLLFKG-EDF |
3 | 4xgqA | 0.11 | 0.08 | 2.78 | 1.82 | HHsearch | | MVIDTSALVAMLSDE-PDAERFEAAVEAD-HIRLMSTASYLETALVIEARFGE-----------------------------------PGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKIS-----------GQPLLFKG-ED- |
4 | 3zvkA | 0.18 | 0.12 | 4.06 | 0.80 | SPARKS-K | | YMLGTNICVYAINKHPDSYYNNLELLAK-NNTIAISSIVLAELQYGVSKSKKK-----EQNQSKLDIFLS-RLEIIDF-----SAKCTFYYGELRTELEQK---------------------------GLIIGNNDLLIASHAIAEN-----------ATLVTNNIKEF |
5 | 5x3tB | 0.13 | 0.09 | 3.27 | 1.36 | FFAS-3D | | HIIDTSALLAYFDAAEPDHAAVSECIDSSADALVVSPYVVAELDYLVATR-----------------------------------VGVDAELAVLRELAGGAWELANCGAAEIEQAARIVTK----YQDQRIGIADAANVVLADRY----------RTRTILTLDRRHF |
6 | 4xgqA | 0.11 | 0.08 | 2.77 | 0.55 | HHpred | | MVIDTSALVA-MLSDEPDAERFEAAVEAD-HIRLMSTASYLETALVIEARFGE-----------------------------------PGGRELDLWLHRAAVDLVAVHADQARAAYRTYGKGR---HRAGLNYGDCFSYGLAKI----SG-----QPL--LFKG-EDF |
7 | 5x3tB | 0.13 | 0.09 | 3.26 | 0.98 | MUSTER | | HIIDTSALLAYFDAAEPDHAAVSECIDSSADALVVSPYVVAELDYLVATRVG-----------------------------------VDAELAVLRELAGGAWELANCGAAEIEQAARIVTK----YQDQRIGIADAANVVLADRYTR-----------TILTLDRRHF |
8 | 5ecdA | 0.19 | 0.12 | 4.02 | 0.69 | CNFpred | | FMLDTNICIFTIKN---KPASVRERFNLNQGKMCISSVTLMELIYGAEKSQ----------------------------------MPERNLAVIEGFVS--RIDVLDYDATHTGQIRAELARQ------RPVGPFNQMIAGHARS-----------RGLIIVTNNTREF |
9 | 3zvkA | 0.19 | 0.14 | 4.38 | 1.28 | HHsearch-2 | | YMLGTNICVYAINKHPDSYYNNLELLA-KNNTIAISSIVLAELQYGVSKSKKK----------------------------------EQNQSKLDIFLS--RLEIIDFSAKCTFYYGELRTELEQ--KGLIIGNNDLLIASHAIAE-----------NATLVTNNIKEF |
10 | 5x3tB | 0.13 | 0.09 | 3.26 | 0.97 | Neff-PPAS | | HIIDTSALLAYFDAAEPDHAAVSECIDSSADALVVSPYVVAELDYLVATRVG-----------------------------------VDAELAVLRELAGGAWELANCG----AAEIEQAARIVTKYQDQRIGIADAANVVLADRYTR-----------TILTLDRRHF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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