Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LQHAPFLKNQEWNPLNDMNNHHQNITQKVSQKNNTLYSQPSNDKSYILKENDIINNVPAGQIKTVFNMIDKAEFMSVSGLERMGFNDEYLAGQQGDEFIIYKFGDDYIRVYNTEFEMNEDLNQLKQPINLKPIEAY |
1 | 1vr8A | 0.06 | 0.05 | 2.24 | 0.78 | SPARKS-K | | -----KIHHHHHHPPEAYSLDTVLETRDYRLSDVDSYGDVEKGKVAVFETEYFLYVYKGEEAKKIWKKLNIR--------SVLDLPNGKFSTVSNGKKIVAWWRKNWLFIVEGKEEFVKHVYRVYEEKQ------- |
2 | 5jy7I1 | 0.16 | 0.14 | 4.67 | 0.48 | FFAS-3D | | ---EDWLTQQRWYAGRNRELVSATTAMAVRLRDGLENYADGPDERYQVDEYSVVATIDPDATRYLLSLIDESRFVREPDVEPLDAPPRVFGAEQSNTSVVF--GEDAIKLFHPDIELNRVLARAGNP--------- |
3 | 4wcwA | 0.11 | 0.07 | 2.38 | 0.30 | HHpred | | -------------------------------------------TDCFV----IASGSNERQVNAIVDEVEEK--MRQAGY-----RPARREGAREGRWTLLDYRDIVVHIQHQDDRNFAALDRLWGDCPVVPVD-- |
4 | 4ayiD1 | 0.19 | 0.16 | 5.22 | 0.64 | MUSTER | | ------LADALTAPLDHKDKGLKSLTLEDSIPQNGTLTLSAQGAEKTFKAGDKDNSLNTGKLKN--DKISRFDF-----VQKIEVDGQTITLASG-EFQIYK--NHSAVVALQIEKINNP----DKTDSLINQRSF |
5 | 2ckgA | 0.15 | 0.08 | 2.72 | 0.68 | CNFpred | | -------------------------------------------PSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFSV--------DILLVPIHLGVHWCLAVVDFKNITYYDS-NEACRILLQYL----------- |
6 | 3cinA2 | 0.14 | 0.04 | 1.25 | 0.47 | HHsearch-2 | | TGYLEPLGDKKFIAIHIEY-------------------VSFNGATDELMING--------------------------------------------------------RI-------------------------- |
7 | 5vfxA | 0.14 | 0.10 | 3.51 | 0.66 | Neff-PPAS | | ----------------DLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVN-----------TETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYL---------- |
8 | 2hjqA1 | 0.08 | 0.03 | 1.16 | 0.45 | HHsearch | | ----------------------------------MFTAKLIKGKTYNVMGITFRAGVSQTVPKKLYEYLNENPYFILTQELNNQ---------------------------------------------------- |
9 | 5vfxA | 0.14 | 0.10 | 3.51 | 0.54 | SP3 | | ---------------KDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVN-----------TETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYL---------- |
10 | 3ucpA5 | 0.04 | 0.04 | 2.19 | 0.49 | PROSPECTOR2 | | VGEKADFSASHALTHAADKPDNSCGTCHSAVPNTAVALADGSNGAPAHSKKPFERGFDFKVMIHQIHADTRSVRRLTTDAATFPEDKGQLSLATLGNKPAFLASTGEYSPTATDSAVIGHFETNGGVYNAAAGTYY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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