Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | NLRESLFGNRGGSEARKAPAPPIARYVSETGDAFILDRAAPQPLMKFENSSEVWVLSPQPAPRGDTIYKNELGEPVLRASKLGGMTLFTTERPGGDAAALMGKATSIQPPPFISVNALFQRLVQASARASRAAQHRIAFETVDDATPATSVLVADTATVTAEAFEKMARNGDRNLLSRVVRVLLAEGHKPGASLKGGDLMVTYAPNRGLAGRPSSKRIIKIV |
1 | 5il5A | 0.10 | 0.09 | 3.36 | 0.70 | SPARKS-K | | -DLHPYISCNISDFKA-----QKFLINVSDTGLYIKTKYQDREMFPFNPIIKLTELSFREP------MLQSNEQIRIVLTPDASYSIEKQSDSSGRLENGNIHLEPFLSQDRIPHEAFYQRLAEFGYSCSDSLNGQVLLKIKAKAGPKGCIIKPEVIESVYQAVIYLAGENAGELPENIKECTIFDTEPVYVYAEQSAYDVYVLDNAGGILMELSGLVF--- |
2 | 4zqvA | 0.14 | 0.08 | 2.78 | 0.57 | FFAS-3D | | ----------------------------------------------FNKDQDYWV----------SVYSTKDFLSVETDSGLGRVRR-------------DPLFPSHLLPPDADNQTIGDAVLIALSN-------------SRTLSLEESADFETGKEQYATWIAMLMEKTKRALFKDMKNCSI--------HCINDLITISPTRHEKLEADSIPEEIGAAL |
3 | 1ei5A2 | 0.21 | 0.08 | 2.43 | 0.29 | HHpred | | --------KRVK-GE-A-KHDIIGRYHSDELADLLLVSEGGAIYGAFEGSMYVWLLPVQRSSPGELVFRRDKGEIGLSVGCWLARGEYRRVQ---------------------------------------------------------------------------------------------------------------------------------- |
4 | 2z6bA | 0.09 | 0.09 | 3.55 | 0.61 | MUSTER | | EKPNRLEGTGQYPRRLGNDTNVLNQGGYDSSSNVIQDSNLDTAINPDDRPLSEIPTDDNPNMSMAEMLRRDEGRLKVYWDTEGGHLIMKQPVRDNKVLSKQVGREITGNPGSITMEEATTLFERDLADMQRDISHSKVGPVWQAVNRSRQMALENMAFQMVGGVAKFNTMLTAMLAGDWEKAYKAGRDSLWYQQTKGVTMIILTGNLESYGVEVKTPARSLL |
5 | 4dpwA | 0.12 | 0.09 | 3.18 | 0.59 | CNFpred | | -----------------------------------------VKSGKAR-AHTNIALIKYWGKADYIIPMN--NSLSVTLDRYTETKVTFDPDFTEDCLILNGNEV---------NAKEKEKIQNYMNIVRDLA-LHARIESENYVLASSASAYAALAAACNEDLSRLARRGSGSASRSIGGFAEWEKGTSYAHGI-DLSMIFVVINNQSKKVSSRSGMSLTR |
6 | 2ns2A3 | 0.19 | 0.04 | 1.31 | 0.57 | HHsearch-2 | | EVVDSLVGKQVE-------------YAKEDGTGMVIHQVEAVYFIKFDDDFHIYVYDLVK------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
7 | 2vhtA | 0.12 | 0.11 | 4.02 | 0.60 | Neff-PPAS | | DAPGSWFDHTSGVLESVEDGTPVLAIGVESGDAIVFDKNGSVSVVQVENGHRGWLVDLTGELVGCSPVVAEFGGHRYAS---GMVIVTGKGNSGKTPLVHALATVRFGEPLSGYNTDFNVFVDDIARAMLQH--RVIVIDSLKNVIDLLSDIGAMAASRGCVVIASLNPTSNDDKIVELVKEASRSNSTSLVISTDVDGEWQVLTRTGEGLQALTHTLQTSY |
8 | 6i8bB2 | 0.15 | 0.04 | 1.36 | 0.49 | HHsearch | | HLADTMIGKAVE-----------HMFET-DGRGMVLARAPTWFYITYEKDPVLYMYQLLDDYK--------EGDL--RI--------MPD------------------------------------------------------------------------------------------------------------------------------------ |
9 | 5z67A | 0.12 | 0.11 | 3.82 | 0.55 | SP3 | | NLLEAI---RLLSMGRSFRGSKMSELVKFDEEYFYVR-----GLVRSADFYEKKIEFGYKVNGNKVIKVN--GNKLKSTGEILGTVIFSPEDIEEGPSRRRKYLDACISVIDKNYFFDLLQYNKTLSNRNSLLKKI----KEEGKGEDLLEIFDEKLAEYGARIIKVRNNYLEKLKNSMSKFL--------MEISNEKLEIIYLNSAGVKEVHEENLIREKL |
10 | 6agqA | 0.11 | 0.10 | 3.77 | 0.78 | PROSPECTOR2 | | MPLSQLQDYKPELTNQKPLHAQVNLVQDYPLKSISIYD------VVYDGADGWYVTPKGEHQPGSLVKNRGYPNELLQWASMGMAALAGGVTPDRAEYPQGGIPGWMTLGILDPASYYYKQVYLDCIRALDGLDSRPKLALPVFPFLCHFRRSVEIYVEIKNWFRRYDPEHRQRTLSYFDGMNMASRIKARTLMAAGPKEVRLYHDYGHEGLPFHEEIEAYL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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