Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | NEKLASQPLLTQMNSPNSSTPICQYHFDATQEDYDLWNNEHPDYFPMKIFPIISGQKFSLKVDPILENEYGNIDYIARSKAGLNSTNDIGDFSIPNKGIIAFEMELKIPTVAVGNSSYISNIDFTGVTNNGYTVRSNYGFHTGTYDPDFGENPPTLNYSLAYRVSDNSGPDHPYFKSQNMTNNMNGYQRLGIYINQNTKQVGFILNGVDQGYQSNLPAPLANIRFSIMNGIAIYSEQLFGQELSSELITDRNALQFSYPQGTTDMCGN |
1 | 2zzjA | 0.07 | 0.06 | 2.43 | 0.80 | SPARKS-K | | ---------------------TRSFYNDGHLNGWDYVRKENQGTVSEVSNVVFKGSALKMTQTYTPGYTGRYHSEVDHNRGYQRG----------EEQFYGFAFRLS--EDWQFQPQSYNIAQFIANRPGDDWMPSTMIWIQNN----------QLYSRYVNGHYRQPNCGRNIVTRPNATVSAGAWHRVVLQIKWASDYFKIWFDGHEENVATTVDDDSVQFRVGLYANSWHMTGTQGFRQVWYDEVAVGTTFADVDPDQA------ |
2 | 2fnjA | 0.15 | 0.11 | 3.78 | 0.66 | FFAS-3D | | -ARI--DILLDMPPASRDLQLKHSWNSEDRSLNI-----------------FVKEDDKLTFHRHPVAQ----STDCIRGKVGL------------TKGLHIWE--IYWPTRQRGTH------AVVGVCTADAPLHS------VGYQSLVGSTEQSWGWDLKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLVALDMDEGTLSFIVDQQYLGFRGLRGKKL-YPIVSAVWG---------HCEITMRYIGGLD----PEPLPLMDLC-- |
3 | 4xw3A | 0.14 | 0.09 | 2.94 | 0.35 | HHpred | | -----------------------------------QMNPYD-----RGSAFAIGGLCCQS--REV-----------------KEWHGCRATKGLM-KGKHYYEVSCHDQ-------G-LCR---VGWSTMQASL-------------DLGTDKFGFGF----GG-TGK-KSHN-KQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPMKQALFPACVLK---------NAE--LKFNFGEEEFKFPPKDGFVALSKA |
4 | 6nzkA1 | 0.13 | 0.13 | 4.37 | 0.77 | MUSTER | | ----------VIGDLKCTSDNINDKDTGPPPISTDTVDVTNGLGTYYVLDRVYLNTTLFLNGYPTSGSTYRNMALKGSVLLSRLWFKPP-FLSDFINGIFAKVKNTKVIKSTFVNTSYSVVVQPRTINKLQGLLEVSVCQYNMCEYPQTICHPNLGNHRKELWHLDTGVVSCLYKRNFTYDVNAD-YLYFHFYQEGGTFYAYFTDTGVVTKFLFNVYMALSHYYVMPLTCNSKLTLEYVTPLTSRQYLLAFN--QDGIIFNAVD-CMS |
5 | 3u75A | 0.12 | 0.06 | 2.12 | 1.27 | CNFpred | | -------------------------------------------------------------------------------------------------GLFDFNITFKVLNLNVSPGKTHFDILINSQELNSSVDSIKIGFDSS-----------QSSFYIDRHIPNVEFPRKQFFTDLAAYLE-LRVFSLYGIVDKN--IIELYFNDGTVAMTNTFFMGKYPHDIQIVTDTE-------EPLFELESVIIRELNK------------- |
6 | 4om9A3 | 0.12 | 0.10 | 3.41 | 0.81 | HHsearch-2 | | NGTVILGAKTFNNIYVAGGPGTVQLNAE------NALGEGDYA---GIFFLDLNGHNQTFKKIAATDS----GTTITNSNTKVNNYIYHGNV----DGNVRLEHHLDTARLILDGD-IQ--AN-SISIKNAPLVMQGHATDHIFRTVSDLSQPDWETRKFRNLNIEDSSSIARNADEGNIQAK-NSVINIG----------------DKTAYIDLYSGKNAGFTFRIKSGDSIGESKFTGG-----IMATDGSIS------------- |
7 | 5x59A2 | 0.10 | 0.10 | 3.62 | 0.95 | Neff-PPAS | | KSACIEVDIQQTFFDKTWPRPIDVSKADGIIYPQGRTYSNITITYQGLFPYQGDHGDMYVYSAGHATGTTPQKLFVANYSQDVAAANSTGTVIISPKIYPAFMLGSSVGNFSDGKMGRFFNHTLVLLPDGCGTLLRAFYCILEPRSGNHCPAGNSYTSFATYHTPATDCSDGNYNRNASLNSFTEDEILEWFGITQTAQGVHLFSSGGNMFQFATLPDTIKYYSIIPHSIRSIQSDRKAWAAFYVYKLQPLTFLLDFSVDGYIRRAI- |
8 | 4qt6A | 0.08 | 0.04 | 1.78 | 0.62 | HHsearch | | -----------------------------------GFDPE-----KAQCC-LVENGQI---------------LTH--GS--GGKGYGLASTGVT-SGCYQWKFYIVKENR---GNEG-TC---VGVSRWPVH----------DFNHRTTS--D----W-LYRAYSGNLYNGEQTLTLS---SFTQGDFITCVLD-EARTISFGKNGEEPKLAFEDVDA-AELY--PCV-FY---SSNPGEKV--KICDQR----------------- |
9 | 3emwA | 0.12 | 0.09 | 3.13 | 0.84 | SP3 | | -----------------------------------LYFQSMPEGLEELLSAPPPDLGAQRRHGWNPKDCSENIEVKEGGLYFERRPVAQSTDGAYSRGLHAWEISW--------PLEQRGTHAVVGVATALAPL------QTDHYAALLGSNSESWGWDIGKLYHQSKGPGAPQYPAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTYLGPARGLKGRTLYPAVSAVWG---------QCQVRIRYLGE------------------ |
10 | 4es8A | 0.11 | 0.10 | 3.79 | 0.93 | PROSPECTOR2 | | EELPDDLMNFKGTWEVSADGSSGSYVFHLIPAKDVKKPGWREHNEVKDSYIKIDKQSIAARYKTSTTAPYSVAFKVNTKSLIKDHDYKITFEQGQIASGITVDYRIGSAFNKTTDDSFASNVKIEGEEQQREQGDKTISFRT-------LKEGPMSLVLLSKVEKKPQGDLDVEFKNLKIIDVTNPSQLDKGVAYVGNKNVQLTLKSDDGGDEISLFNSRGELLQTVTVTKDQQNPLKNKEKLKVSIKQKQSKKTSKDVGIDPKVEAK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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