Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | SYCEANSSISHTWVDEGISPCFYFTLVPAILLTISFFLGTIHCICYQKYGTAMEPKFIPRSRLYGFQLALSVLLVVQFLGGIVWQATTGGELPGYVVLYGCFSVLAWAWAISLLRVERRRVLVMDRTRGHSTFLLLFWALAFSAENLAFVSWYSPHWWWALENNKQQVQFALWLIRYICTGLLFFIGLKAPGLPRRPYMLLINEDERDVENSGQSLLGRTEENQSTWKGFRQKVRLLVPYMWP |
1 | 2z73A | 0.09 | 0.08 | 3.17 | 1.13 | FFAS-3D | | -WYNPSIVVHPHWREFDQVPDAVYYSLGIFIGICGICGGNGIVIYLFTKTKSLQT----PANMFIINLAFSDFTFSLVNGLMTISCFLKKWIFGVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKIMIIFVWLWSVLWAIGPIFGWGAYTLYISRDSTTRSNILCMFILGFFGPILIIFFCYFN-------IVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIFLWP |
2 | 3rkoB | 0.09 | 0.07 | 2.67 | 1.05 | CNFpred | | -------------------PTPVSALIHAATMVTAGVYLIARTHGLFLM-----------TPEVLHLVGIVGAVTLLLAGFAALVQTD----IKRVLAYSTMSQIGYMFLALGVQAWDAAIFH-------LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSATAGFFSKDE---ILAGAMANGHINLMVAG----------VGAFMTSLYTFRMIFIVFHG |
3 | 5do7B2 | 0.06 | 0.05 | 2.35 | 1.01 | Neff-PPAS | | -----FGHGSIQLSFMDTAALLFMIGALIPFNVILDVISKCYSAMLYYELEDGLYTTGPYFFAKILGELPEHCAYIIIYGMPTYWLANLRPGLQPFLLHFLLVWLVVFCCRIMALAAAALL------PTFHMASFFSNALYNSFYLAGG-------FMINLSSLWTVPAWISKVSFLRWCFEGLMKIQFSR-----RTYKMPLGNLTIAVSGDKILSVMELDSYPLYAIYLIVIGLSGGFMVL |
4 | 6ei3A | 0.12 | 0.11 | 3.79 | 0.99 | SPARKS-K | | WWQLERARGTHPDAAVDGVRALLRVLVIFALVTPFFSLFDQKATWVLQGREMRMPAWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPT----SLRRMTSGIAFSGVAWIAVGAIQVAMDGEPMHIAWQILPYALLTFGEVLVSATGIEAYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRNA-----------TVTSHIADTG---------LSEAAFLMFFFAAFAFLAALA |
5 | 2ziyA | 0.09 | 0.09 | 3.28 | 1.10 | FFAS-3D | | -WYNPSIIVHPHWREFDQVPDAVYYSLGIFIGICGICGGNGIVIYLFTKTKSLQT----PANMFIINLAFSDFTFSLVNGLMTISCFLKKWIFGVYGFIGGIFGFMSIMTMAMISIDRYNVIKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLYISRDSTTRSNILCMFILGFFGPILIIFFCYF-------NIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIWP |
6 | 5twvB | 0.19 | 0.17 | 5.45 | 0.29 | HHpred | | --CGTENH-SAAYQGVLNNGCFVDALN-VVPHVFLFITFPILFIGWGSQSSKVHIHHFPGHNLR---WILTFILLVCEIAEGILSDTESRHLHLY--MPAGMAFMAAITSVVYHNIETSNF------PKLLIALLIYWTLAFITKTIKFVKFYD-----HA-IGFSQLRFCLTGLLVILYGMLLLVEVNVIRVRRYIFEVKPPEDLQDGVRFLQPFVNL-LSKGTYWMNAFIKTAHKKP---- |
7 | 5tgzA1 | 0.12 | 0.12 | 4.09 | 0.80 | MUSTER | | GGRGENFMDIECFMVLNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHSRS----RCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRFKLGGVTASFTASVGSLFLAAIDRYISIRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYA-YILWKAHSHAPDQARMDIELMVYDVFGKMNKLIKTVFAFCSMLCLLNSTV-P |
8 | 3rkoC | 0.09 | 0.07 | 2.50 | 1.04 | CNFpred | | ----------------------EYLLMLGFFIAFAVKMPVLHGWLPDAHS----------QAPTAGSVDLAGILLKTAAYGLLRFSL-----PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ----TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA-----VIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLW---------------------SKMKWLPALSLFFAVATLG |
9 | 2pffB | 0.13 | 0.12 | 4.14 | 0.92 | HHsearch-2 | | TLSHGSLELPEPADDEPTTPAELV----------------GKFLGYV-SSL-VEPSKVDIHALA--AKLLQTLVTKELIKNYITARFDGNTDDYFEELRDLYQTYHVLVGDLIKFSELIRTPSNTPDKDYLLSIPISCPLIGVIQLAHLRSYLKGAGLVAIA-ETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQ |
10 | 5do7A2 | 0.09 | 0.07 | 2.84 | 0.92 | Neff-PPAS | | ---RVRSNVLKGAIQDRVGLLYQFVGATPYTGMLNAVNLFPVLRAVSDQESQDGLYQKWQMMLAYALHVLPFSVVATMIFSSVCYWTLGLHPEVARFGYFSAALLAPHLIGEFLTLVLLGIVQNPNIVNSVVALLSIAGVLVGSGFLRNIQEMPIPFKIISYF---------TFQKYCSEILVVNEFYGLNF---------------------------TCAFTQGIQFIEKTCPGATSRFTM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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