Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MPSRRVARSSAAPELGPLGSADLSSLSLAVSRTTEIIDEYIKENGFGLEGAQPGPGEGLPRLVSRGAASLSTVTLGPAAPPPP |
1 | 2ql3L2 | 0.20 | 0.19 | 6.19 | 0.93 | SPARKS-K | | EPVVLGAEHPLAGVDGPVRLADLAEHPVLLDASTNHAD-VCREAGFAPRVAYRTARGLGWTLLLQRPLPVVVKPIAEPKPASV |
2 | 1i96R | 0.14 | 0.13 | 4.52 | 0.41 | FFAS-3D | | -PKKEAQRRPSRKAKVKATLGEFDLRDY---RNVEVLKRFLSETGKILPRRRTGLSGKEQRILAKTIKRARILGLLPFTEKL- |
3 | 5gmkq2 | 0.18 | 0.11 | 3.54 | 0.29 | HHpred | | ---------------------------PVLSPKSSLLEQYVKDTGNDPITNEPLSIEEIVEIVPSAQQASDFVARGKL----- |
4 | 3fzvB3 | 0.17 | 0.17 | 5.53 | 0.66 | MUSTER | | PPQR-LPEGHRFAGQAQVSLRDLCLEPILLDVSRTYFVSLFEELGLTPNIAFSSPGFGLVTRPHSETYDGKKVVV-DLAEPVS |
5 | 4i8oA | 0.19 | 0.10 | 3.11 | 0.44 | CNFpred | | -----------------------KNLNLVRANIETESRQFIENKNYSIQSIGPMPGSAGLRVVFT------------------ |
6 | 2pffB | 0.25 | 0.25 | 7.83 | 0.33 | HHsearch-2 | | FVSVRKTSLPSILEDSLENNEGVPSPMLSISNLTEQVQDYNKTNSHLPAGKQVEISNGAKNLVVSGPQSLYNAPSGLDQSRIP |
7 | 5ujpA1 | 0.27 | 0.19 | 5.92 | 0.87 | Neff-PPAS | | ----------------------NALFSVPVSDQEKAKDFYVETVGFDLLADQPG--VHGRWLQVAPKGADTSLVLVDWFPTPP |
8 | 1v32A | 0.19 | 0.16 | 5.07 | 0.43 | HHsearch | | SGKRFEFVGWGSRQLIEFLGKDT---SEMISRYDDTIAKYISKEGLLDPS--------NKKKVVC-DKRLVTIFRMENQDSG- |
9 | 2n5dA | 0.25 | 0.24 | 7.46 | 0.64 | SP3 | | PGSYTGAGEPSQADLDAL----LSAVRDNRLSIEQAVTLLTPRRGGGSGGGSMDAKEILTRFKDGGLAAAQALLAGPAAAPRP |
10 | 1zvoC2 | 0.09 | 0.06 | 2.30 | 0.47 | PROSPECTOR2 | | AQASSVPTAQPQAEGSLAKAT-----------------------TAPATTRNTGRGGEEK----KKEKEKEEQEERETKTPEC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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