Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | DWTATYFQLDKAQIAKNLGLTEQTLVTNGGSSVTVYSVKEDGTKVAPNSKHAGAGGNAGDWHDANGHSLSASTGIFYHVINYSNFSVGIGQRPTAGITYGQSFAFKLVVEYIPASG |
1 | 6beaA1 | 0.14 | 0.13 | 4.45 | 0.77 | SPARKS-K | | TVSTDPVTLNTEK--TTLDQD---VVINGDNKITAVTIEKDLNVTFGGHDTVNQDFVEGVKVSGNKNVINATDSTITAQGEGTYVRTAMVIDSTGDVVVGGNFVAKTGISLEATTG |
2 | 2d62A2 | 0.10 | 0.09 | 3.22 | 0.57 | FFAS-3D | | --GEFKLKLLQDQFEV--------LEEENVGKEVIFGIRPEDVHDASFTHIDVPEENT---VKATVDIIENLGGEKIVHLRRGNISFTAKFPKESKVREGDEVSVVFIHIFRKDTE |
3 | 2phcB | 0.18 | 0.16 | 5.05 | 0.35 | HHpred | | -YGG-EFGPDIEFVAQYNGLSVDDVIEISKPLYRVYFLGPDERIATPRLEKP------RLK-VPAGSVGIAGKTGWYAIESP-GGWRIIGRIPLSIVLPGDYVKFVPIDE------ |
4 | 2d62A2 | 0.09 | 0.09 | 3.24 | 0.79 | MUSTER | | D--DGFLDFGEFKLKLLQDQFEVLEEENVGKEVIFGI-----DVHDASFTHIDVPEENTVKAT---DIIENLGGEKIVHLRRGNISFTAKFPKESKVREGDEVSVVFIHIFRKDTE |
5 | 4r04A | 0.12 | 0.11 | 3.97 | 0.77 | CNFpred | | --YSLLLSGDKNYLISNLSNTIEKINTLGSKNIAYNYTDENNKYFGAISQKSIIH-NILEFYNDSTLEFNS-AEDINVFMKD-DINTITGKYYV--NNTDKSIDFSISLVSKNQVK |
6 | 4b4tR | 0.12 | 0.05 | 1.81 | 0.49 | HHsearch-2 | | QLLESYKTLSLKSMASAFGVSVAFLDNDPNKQLNCVIDRVNGIVETNR-------------------------------------------------------------------- |
7 | 4d3lA | 0.13 | 0.13 | 4.47 | 0.78 | Neff-PPAS | | -SDGYTIKPNKKVTYSALGFSYKDFGISSSEKITEVQVNKNIGKYVGQFGTSTTDSANGYWAGDEITQSISGNSGTITWKVPSDISSIIQTQYGGEIKDCDEFTIDSVVLKLEHH- |
8 | 2phcB2 | 0.17 | 0.16 | 5.09 | 0.50 | HHsearch | | AYGG-EFGPDIEFVAQYNGLSVDDVIEISKPLYRVYFLGPDERIATPRLEKP------RL-KVPAGSVGIAGKTGWYAIESP-GGWRIIGRIPLSIVLPGDYVKFVPIDEKEFW-- |
9 | 2d62A2 | 0.09 | 0.08 | 2.98 | 0.69 | SP3 | | DFGEFKLKLL--------QDQFEVLEEENVGKEVIFGIRPEDVHDASFTHIDVPEEN-----TVKATVDINLGGEKIVHLRRGNISFTAKFPKESKVREGDEVSVVFIHIFRKDTE |
10 | 4aq1A3 | 0.07 | 0.06 | 2.54 | 0.53 | PROSPECTOR2 | | QNQGFTLVDNLSN----APQNTVAFNKAEKVTSMFKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIAAAINGSELLVTANAGQSGKASFEV---TFKDNTKRTFTVDVK---KEP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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