Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | FYAGTWQFVDPHNQRHHRLEISPNLDVHIDGRSLEVRVQELNEHQLTFQDKFGYHLVIHANEQQPISFFDEADDCTYT |
1 | 5no8A2 | 0.06 | 0.05 | 2.26 | 0.81 | SPARKS-K | | -VLVSCNKYVFEKGEKARVECREACTAKMNGVPVP---VKQEGNLCFVEVPMEVRFDFYYNGNKHADCLVIS------ |
2 | 2jmbA | 0.15 | 0.13 | 4.29 | 0.48 | FFAS-3D | | -YVGIW--VTADGRIRQELLPNGRYDEARGNRKSAYQRYEVRGAHINYWDDTGFTADGDFVSANELHH---------- |
3 | 2mhdA | 0.10 | 0.10 | 3.77 | 0.31 | HHpred | | QLVGKWIVKEPVLDFVTCYTFNADKTYEVLSNGVRGTIISLDEKLIKLYDKEEEQYHILKLTSKEMKWENASPKDGNS |
4 | 6hvgA | 0.14 | 0.14 | 4.81 | 0.64 | MUSTER | | YVAGQTYYFDGNGQPLIGLQTIDGNLQYFQGVQIKGGFQDVNNKRIYFAPNTGNAVANTEIINGKLQGRDANGNQVKN |
5 | 5xn9A | 0.11 | 0.10 | 3.71 | 0.76 | CNFpred | | --HYHHQISVPDKNYKNDVNFK-EGTTQHNNTEIKYKYTED-GGNLKAEVHKVIHDEYKVNG-DELEKTYKVGDVTAK |
6 | 2mhdA | 0.10 | 0.10 | 3.77 | 0.39 | HHsearch-2 | | QLVGKWIVKEPVLDFVTCYTFNADKTYEVYTNGVRGTIISLDEKLIKLYDKEEEQYHILKLTSKEMKWENASPKDGNS |
7 | 3bwsA1 | 0.09 | 0.08 | 2.95 | 0.68 | Neff-PPAS | | ----------GTEIVKFSIHPYKGTVIRLGEEILPFKVLEMDKNIALVEAIKEIELKLSSPGFQNSSYRIRKPEELNE |
8 | 2mhdA | 0.10 | 0.10 | 3.76 | 0.46 | HHsearch | | QLVGKWIVKEPVLDFVTCYTFNADKTYEVLSNGVRGTIISLDEKLIKLYDKEEEQYHILKLTSKEMKWENASPKDGN- |
9 | 2rn4A | 0.10 | 0.10 | 3.77 | 0.79 | SP3 | | DLAGQWTLQQDEAPAICHLELRDSEVAEASGYDLGGDLTRWLPSEPRAWRPTPAGIALLERGGLTLMLLGRQGEGDYR |
10 | 2m4lA | 0.11 | 0.10 | 3.74 | 0.44 | PROSPECTOR2 | | NIIGYW--STGIEGTHKLLSFDEDFGIYSNATPISFQMFKIEEGRIYIYDEKTPYYLDCKISGTTLKVETGSEAGTYK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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