Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | EALRQEWVRTQFQKANRFLAEKGILPGKVLIDESRYLVPYVAVWKMEAQKPAKQTYWVMSGDLPTDYVDVKVAQTARDALKHFSMMWQLKAENLIQSGAVQDPTQAKFANMLISRAQSLYQIQQDDKLW |
1 | 5cwiA1 | 0.12 | 0.10 | 3.57 | 0.67 | SPARKS-K | | CKKAESEAREARSKAEELRQRH---PDSQAARDAQKLASQAAVLACELAQEHP---------------NADIAKLCIKAASEAAEAASKAAELAQRHP--DSQAARDAIKLASQAAEAVKLACELAQEH |
2 | 2qupA | 0.11 | 0.08 | 2.78 | 0.63 | FFAS-3D | | GKQRDEKAYERLQALMSKIDD--------------------------------------QGKLLSETRTIEELRKYKELVKEFVGDAVELGLRLEERNRRGRTKIYKIVKEVDRKLLDLTDAVLAKE-- |
3 | 2j0kB | 0.09 | 0.08 | 3.00 | 0.37 | HHpred | | ---DLASYAYQLSTALAYLESKRFVHRDIAARNVLVSATD----CVKLGDFGLSRL-PI-KWMAPESINFRRFTSASDVWMFGVCMWEIVIGRIENGERLPPNCPPTLYSLMTKCKAQLSTILEEE--- |
4 | 5cwpA2 | 0.14 | 0.12 | 4.22 | 0.75 | MUSTER | | DVNEALKLIVEAIEAAVRALEAAERTG---DPEVRELARELVRLAVEAAEEVQR--------NP----SSEEVNEALKKIVKAIQEAVESLREAEESG--DPEKREKARERVREAVERAEEVQRDPSGW |
5 | 4pedA | 0.10 | 0.09 | 3.40 | 0.56 | CNFpred | | QEIRNEICYNILVLCLRELFEF----------HFMQTDPNWSNFFYDPQ---QHKVALLDF-GATREYDRSFTDLYIQIIRAAADDRETVRAKSIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPF |
6 | 6cq0A | 0.13 | 0.12 | 4.28 | 0.34 | HHsearch-2 | | PESEFLIVLRDVVGGMNHLRENGIVHRDIKPG--NIMGEGQSVYKLTDFGAGVTFYHAATGSLPFRPFEGP-RRN-KEVMKIITGKVQ----KAENGPIDPVSLSRGLQVLLTPVLANILEA-DQEKCW |
7 | 3nxcA2 | 0.04 | 0.03 | 1.69 | 0.66 | Neff-PPAS | | ---IEFIEDSLITRINLILKDEK---------DTTARLRLIVLLLLGFGERNPGLTRILTGHA-------RLQGRINQLFERIEAQLRQVLREKRMREGGYATDETLLASQILAFCEGMLSRFVRSEFK |
8 | 4y83A2 | 0.10 | 0.09 | 3.18 | 0.38 | HHsearch | | REFEIIWVTKHVLKGLDFLHSKKVIHHDIKPSNIVFMSTKA---VL--VDFGLSV--QMTEDFPKDLR-GTEIYMSPEVILTKADIYSLGLIHMQTGTPPVKDCSPGMRELIEA-------SLERNNH- |
9 | 5m06A | 0.15 | 0.12 | 4.17 | 0.76 | SP3 | | PVGEVLAIVTAVAGALDYAHQRGLLHRDVIASQPSYPAPEL----SAGADVDGRAQYLFAGAPPVDRSLQPPK------LSAFRPDLARLDGVLSRAATAPAGSCREFADAMNEQA------------- |
10 | 1jt1a | 0.16 | 0.16 | 5.19 | 0.53 | PROSPECTOR2 | | LEANVPMIKASIKKDVSVILSGGKSDFHYANDSSTYFTQSTTTWTMKLKDHGKQYQAVIIGSIGYKLVDNITYPKIAEDYKHSIKVLKNKYVLLSKGQNNPFVDPTGCKNYIEQKANDFYTELKKQETG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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