>PF16106 (261 residues) TNAIALSSVARNRADEPESRVMLSERELALPAGGYRHAENSGLALALNWRVLDADEERPD YGYSLHAGRPAWLDAGRLAALGFDTAAGDATPEARERFTRQLPRQVLIVLELAGPAWQQA VERARANALRRTAAATANPDSKAFAEQAKAARDNLAIEEGHASRLFAIDAGLDAAVLRAR YPDRQRTLILRGTVRPSVRSSDRQHRLAGYISAIAIDRINVPFAWRGLLEPLRNTSRPAA SERTPRYQAQVAVGQHLEPWI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | TNAIALSSVARNRADEPESRVMLSERELALPAGGYRHAENSGLALALNWRVLDADEERPDYGYSLHAGRPAWLDAGRLAALGFDTAAGDATPEARERFTRQLPRQVLIVLELAGPAWQQAVERARANALRRTAAATANPDSKAFAEQAKAARDNLAIEEGHASRLFAIDAGLDAAVLRARYPDRQRTLILRGTVRPSVRSSDRQHRLAGYISAIAIDRINVPFAWRGLLEPLRNTSRPAASERTPRYQAQVAVGQHLEPWI | |||||||||||||||||||
1 | 3gn6C | 0.12 | 0.11 | 3.75 | 0.61 | SPARKS-K | AFNPWTDAALDTIRDVNQALTLYAERTVSAKLRVLPG------FLSLALKQ---------SGDSTVKNYPE-------TYKG---VLATAYLDGVAAGTQPYFYNLFVRFA-DGRAARAFEALFETHIHPLLHAAPRGGDGPELAEEIRSFLRRPLPERE----TVTVENHVKHAAWEPQVPGARRKALSTEILRNAHADGGLRAYIHGVWESVWHENSHLDPRFLAAAGPVGAAAVVG--PVEPFYLTRRLVVAD----- | |||||||||||||
2 | 4qsgA2 | 0.08 | 0.04 | 1.50 | 0.65 | FFAS-3D | --------------------------------------------------------------------------------------------------------EVSIKIFWDNQWELQAALESNPKLKQERDAMMGKNLNMEEIIHIQLIEATVLRRKQDIIQ-------VFRDQLNHRAQ------------EVIESDPMTDDMIYNAAYLIPWEQE---PEFSQNVEAID-------QQFGDRLRIRYN-N----LT- | |||||||||||||
3 | 5wyjB1 | 0.15 | 0.10 | 3.36 | 0.31 | HHpred | ----TLIRSLVRRMTKST----LND--IQGPIT-V----VSGKHRRLTFLECPA------------DDLNAMIDIAKIADFGFEMETMEFL---NIAQHHGMPRVLGVATHLDL-----------------------FKSQSTLRASKKRLKHRFWTEVYQGAKLFYLSPDREILNLSRKWRNEHPYMLADRFTDLTHPEIDRKVAIYGYLHGLPSTRVHIAG-----VGDFSV--------------------------- | |||||||||||||
4 | 3nksA | 0.10 | 0.10 | 3.52 | 0.70 | MUSTER | GALGARTLLLVSELGLDSEVLPVRG---DHPAAQN------------RFLYVGGALHALPTGLRGPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVAAMDSLCRGVFAGNSREIRSCFPSLFQAEQTHRSILLGLLLGQPDSALIRQALAERWSQWSLRGGLEPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHV-IPSVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLP | |||||||||||||
5 | 6bt5A | 0.08 | 0.06 | 2.39 | 0.55 | CNFpred | --ISGVIGAAASS-----VSIMVANILR--------------KIPQISYASTAPELSDTRYDFFSRV----VPPDSYQAQA-------------MVDIVTALGWNYVSTLASEGNYGESGVEAFTQISREIGGVSIAQSQKIPREPRPGEFEKIIKRLLEPNARAVIMFANEDIRRILEAANQSGHFLWIGSDSWGSKIAP-QEEIAEGAVTILPK--RASIDGFDRYFRSRT---------------------------- | |||||||||||||
6 | 3venA3 | 0.15 | 0.11 | 3.75 | 0.42 | HHsearch-2 | --QHHLAHAASAYYGDRGAVLIVDGQG---------EEECVTLKITVLDTVPGAW-------------SLGFFYEHVSEYTGLGG-DNPGKLMGLAAHGTTLSAFAGYRLNRDWRAWFAHLERI---YRLPPNKRDTRRDPYEYRDLAATAQAALERAVFGLA-----------DSVLARTG--ERTLFVAGGVGLNAT-------MNGKLLTRTVDKMFVPPVLGAAAAVAVELGD----RIAPMGD------------- | |||||||||||||
7 | 3ug6A | 0.06 | 0.06 | 2.48 | 0.68 | Neff-PPAS | TTMSAATGVYLAEKGLPAHSLRDIFEQEFGHEPTKVKGYDNLYVVEIDPQKAMEEYKEKLKAQIEENPFLGEMLEDQLEMAALSPGTDESAAFDVFLKYMDSNEFDVVIFDTAPEVMDKYMTKLIKLRKQMSGFMKMMKMLEELEKMKERIVRARNILSDPERTAFRLVVIPEEMSILESELQKYGIPIDAVIVNQLIPEDVQC------------------DFCRARRELQLKRLEMIKEKFGDKVIAYVPLLRTEAKGI | |||||||||||||
8 | 2nrkA | 0.10 | 0.05 | 1.86 | 0.38 | HHsearch | VEFEEEAQALKQILKENCLKVEHI-GSTSVPNL-A-A--KPIIDFLV--IVEEIE------------KVDL--LQWEFERIGYEY-GEFGLS-GRRYLRKGPIRTHVHIYQFDNQEILRHLAAIATTYGTLKKQLAQAPDSIDFKKIEKEALKKYWE-------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2axnA1 | 0.12 | 0.09 | 3.25 | 0.56 | SP3 | --------------------------------LELTQSRVQKI------WVPVDHRPSLPRSCGPNSPTVIVMVTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFF---RPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIANTTRERRHMILHFAKENDFKAFFIESVCDPTVVASN----------------IMEVKISSPDYKDCNSAEAMDDF---MKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFL--V | |||||||||||||
10 | 2wooA | 0.05 | 0.05 | 2.11 | 0.84 | PROSPECTOR2 | SLKWIFVGIQMSKVRSSVLLISTDPDAFGTKFGKDVPGFDNLSAMEIDPNLSIQEMTEQALSGMMQDLAFTIPGIDEALAF----------AEILKQIKSMEFD--CVIFDTAPTVLEKALGKLGGPMINQMGSIMGQDLFGKMESMRANISEVNKQFKNPDLTTFVCVCISEFLSLYTSYEIDTHNIV---------------------VNQLLLDPNTTCPQCMARRKMQQKYLAQIEELYEDFHVVKVPQVPAVKPYV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |