Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | LYDVVARVATTSIGQFVYKRVDNLLWTMEKTARWSLPQPSPVGGAVSSKKSSPEADEDIGSNISGPPLIRPLPWLLFLPALIVLRMVRSTLSLGARFIGRDPVLPSSMVGFLQNKRRKLRALKYRGQRLQRIAKVEQEADPKQVTWLQRIILPLRMVICTRPYRTIDTNSDVAHAVIFRKDRPASSAGQKRVESKKRNLNQREAESEEEECSDEYSFEDAGCKELLDKYANEEDSSFN |
1 | 5yfpA1 | 0.10 | 0.10 | 3.68 | 0.80 | SPARKS-K | | NDECHRIIPTLSLFLMEMSNFSNDIENVESQ------DNGLQVESANKKLLWNTLDELLKTVSLDEISLNQLLLPWMENQLNLLLKAFQAIDGNEVEYNLREISGLKQRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDIHDQMIRILTTLLIFSPLILF--CKEISQKSYQAIVENWDEKMNELSLSQLLNEWDTFR-KERKTNDINPVFKNSFSLLTECLQTMRQECIVYQNEVFF |
2 | 6c14B | 0.08 | 0.05 | 2.13 | 0.82 | FFAS-3D | | -TNYVRNSRAVGVMWGTLTICFSVLVMALFQPYW-IGDSVQAGYFGLFSYCVGNVLSSELICKGGPLDFSSIPAFKTAMFFVALAMFLIIGSIICFSLF-FVCNTATVYKICAWMQLAAATGLMIGCLVYPDGWGHCTIRWAFMLAILSIGDALILSF-------------------------------------------------------------------------------- |
3 | 4fnvA1 | 0.13 | 0.08 | 2.61 | 0.27 | HHpred | | -----------TISEAEQAKADYALYEDKGGINWEYPKDSDEYQLHRHQWVSGDEKENNPK---PTTGPNTTSWW---QLQVSTRIG-DQVQLLEYFKNSVNFTPEWLSTFLVEFAEQADFLVDY-------PYE-SG---GNILISQANAL-ATAGTLMPEFK-------------------------------------------------------------------------- |
4 | 4ci6B2 | 0.15 | 0.15 | 5.07 | 0.75 | MUSTER | | LRTHLSSAATKQLMGVVLSDLDTMLVALDKAEREGGVDKDQLKSNSLILKTYSVIGAYILSIVEPSHLDQTHSFSDIGSLMRAHKHLETLLEVLVTLSQQGPVSSSFLNRLAEAKVTLSQQLNTLQQQQESAKAQLSILINRSGSWADVARQSLQRFDSTRPVVKFGTEQYTAHAAITLQEVSEFTDDMRNFTADSIPLGRSSLMDEHLVEQREKLRELTTIAERLNRLEREWM---- |
5 | 6f34A | 0.06 | 0.03 | 1.11 | 0.67 | CNFpred | | AFDLTMLGIGAIIGTGIFVLTGVAAAEHAGP---------------------------------------ALVLSFILSGLACVFAALCYAEFASTVPV---GSAYTYSYATFGELIAWILGWDLILEY--------------GVASSAVAVGWSGYFQ------------------------------------------------------------------------------- |
6 | 2pffB | 0.17 | 0.16 | 5.09 | 0.57 | HHsearch-2 | | LRDL-YQTYHVLV-GDLIKFSAETLSELIRTTEKVFTQGLNIL----------E-WLENPSNTPDKDYLLSIPI--SCPLIGVIQ-LAHY-VVTAKLLGFTPGHSQGLVTAVVSVRKAITVLFFIGVRCYEAYPNEDSNNEQVQDYVNKTNSHLPAGKQVEISLVN----G-AKNLVLRKAKAPSGLDQSRIPFRKLKFSNRF----LPVASPFHSHLLVPASDLINKDLVKNNVSFN |
7 | 5cwqA | 0.08 | 0.08 | 2.94 | 1.02 | Neff-PPAS | | ARKRSEEARERGDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGD--DEVLALALIAIALAVLALAEVACCRGN------SEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQG----------------DSEVKRLAEEAEQLAREARRHVQECRGGWLE |
8 | 5jynA | 0.38 | 0.05 | 1.50 | 0.28 | HHsearch | | ------------------------------------------------------------------------NWIIIVGSLIGLRIVFAVLSLVNRVRGYSPLS-------------------------------------------------------------------------------------------------------------------------------------- |
9 | 1cc1L | 0.10 | 0.09 | 3.42 | 0.66 | SP3 | | LIFGANYLQSHILHFYHLAALDYV-----------------KGPDVSPFVPRYANADLLTDRIKDGAKADATNTYGLNQYLKALEIRRICHEMVAMFGGRMPPTADKVAEYAARFKEVQKFVIEEYLPLIYTLGSVYTDLFETGIGWKNVIAFGVFPEDDDYKTFLLKEFDSKLVKEYVGHSFFDHSAPGGLHYSVGETNPNPDKPGAYSFVKQNPELSPVGQKLLKELYGIEAKKFR |
10 | 4ci6B2 | 0.14 | 0.13 | 4.61 | 0.84 | PROSPECTOR2 | | LSDLLRTHLSSAAMGVVLSDLDTMLVALDKAEREGGVDKDQLKSFNSLILKTYSVIGAYILSIVEPHLDQTHSFSDIGSLMRAHKHLETLLEVLVTLSQQGQPVSSETYSFLNRLAEAKVTLSQQQQQQESAKAQLSILINRSGSWADVARQSLQRFDSTRPVVKFGTEQYTAIHRQMMAAHAAITLQEVSEFTDDIQLGRSSLMDEHLVEQREKLRELTTIAERLNRLERE----WM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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