Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IYYIGDDADGVPILRRKSLSSTGMGNDEQLVEGIENMRVMYGFDSNGDSTADRYLAAKDVTSLMWDNELFQRLVALRVHLLVRSTEADNSYTNETTYTLGDKTIGPLNDHFRRKVLSTTIVLEN |
1 | 5g23A | 0.18 | 0.16 | 5.27 | 0.84 | SPARKS-K | | RGTGYEVNQG--ALRWGACKGEGCAPNNPVLGGVEAFRVAYLEGG-------TWKR-QAQAVNLRPEGASPKVSALALYLLASVPVGAPAFTPGSTLSYPPGLPGAPNDGRLRAEKLWIVQTPN |
2 | 5g23A | 0.17 | 0.15 | 5.04 | 0.51 | FFAS-3D | | TGYEVNQG----ALRWGACKGEGCAPNNPVLGGVEAFRVAY-LEGGTWKRQAQAVNLRPEGAS-------PKVSALALYLLASVPGGAPAFTPGSTLSYPPGLTSAPNDGRLRAEKLWIVQTPN |
3 | 5g23A | 0.19 | 0.16 | 5.20 | 0.30 | HHpred | | -YEVN----QG-ALRCKGEGCA-PLPNNPVLGGVEAFRVAYLE-G------GTWKRQAQAVPGASPK-----VSALALYLLASVPVRGGAFTPGSTLSYPLELPGAPNDGRLRAEKLWIVQTPN |
4 | 5n8pA | 0.13 | 0.13 | 4.48 | 0.70 | MUSTER | | TTTVGANSAASGTVSVSVANSSTTTTGAIAVTGGTAVTVAQTAGNAVNTTLTTVTGNSSTTAVTVTQTAVAGRVNGAVTITDSAAASATTAGKIATVTLGSGAATIDSSALTTVNLSGTGTSLG |
5 | 5g23A | 0.16 | 0.15 | 4.84 | 0.96 | CNFpred | | VRGTGYEVN-QGALRWGACKGCAPLPNNPVLGQVEAFRVAYLEG-------GTWKRQ-AQAVNLRPEGASPKVSALALYLLASVPVGAPAFTPGSTLSY-LELPGAPNDGRLRAEKLWIVQTPN |
6 | 3cfiB | 0.19 | 0.12 | 3.89 | 0.89 | HHsearch-2 | | GYRIKDE-----RLERVWWRYPDEGVVTPLLSDVEELNVRFYDGK-------QWINEWSN-ELTL-------PAAISVELTLKDYGKI-----ARTYLTPEG---------------------- |
7 | 5g23A | 0.15 | 0.14 | 4.64 | 0.83 | Neff-PPAS | | VRGTGYEVNQGALRWGACKGEGCAPPNNPVLGGVEAFRVAYLEGGTWKRQAQAVNLRPEGAS--------PKVSALALYLLASVPVGSTLSYPPGLTSSLLELPGAPNDGRLRAEKLWIVQTPN |
8 | 3cfiB | 0.23 | 0.15 | 4.54 | 0.77 | HHsearch | | GYRIKDE-----RLERVWWRYPDQGVVTPLLSDVEELNVRFYDGK-------QWINE-------WSNEL-TLPAAISVELTLKDYGKI-----ARTYLTPEG---------------------- |
9 | 3njeA | 0.11 | 0.08 | 2.90 | 0.95 | SP3 | | RWSLSGE-----TLERRYWAQDSKPRVQQVLDGVTALSWRFLDKEHN------WQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKL-----VRVWRLLDPPLKQ------------------ |
10 | 4aq1A5 | 0.09 | 0.08 | 3.09 | 0.56 | PROSPECTOR2 | | VLQDIKVDATSVKLS-----DEAVGGGEVEGVNQKTIKVSAVDQYGKEIKFTEGLVIKNVNSDNTIDFDSGNSATDQFVVVA-----TKDKIVNGKVEVKYFKNASDTTPTSTKTITVNVV-NV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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