Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MKEVQLIRKSELSEGGCNACGVVEATSYTLKLDSNQAIISELTVGGLVDSLALAEGFTGEDIYEMFSEVRQLKKGEKCIEVHHESPNVRFKRGDNEMIFKNHVSDHTELYEIVNQILTGLFELGPYEFK |
1 | 1k2yX3 | 0.10 | 0.07 | 2.58 | 0.74 | SPARKS-K | | ----------------------------DISTPEINITVTEDSKFAIIEALQRDAQWGEGNITTL--DGVRVDYPKGWGLVRASNTTLRFEADTE--------EELERIKTVFRNQLKAVDSSLPVPF- |
2 | 1y13A | 0.11 | 0.10 | 3.60 | 0.66 | FFAS-3D | | -PSFSFNCAHFIAYNG--FRETLHGHNYNVSLRDDGYVIDFSILKEKVKKVCNK--LDHHFILPIYSDVLKFENVKNNIKIICEDNSEYSFPERDCIKLPIKHSSTEEIGQYILNQLIE---------- |
3 | 2fgtA2 | 0.16 | 0.11 | 3.63 | 0.25 | HHpred | | -------------------------PNKPLTMDKKEFVTESIKTNTFKQALFSDPSIVRE---------NVLTDGISRLDVNLSQRQVQFQQL-V----QSTSYQTGELIKKSQKYLEDTGSWDHYQFF |
4 | 2lciA | 0.17 | 0.16 | 5.33 | 0.64 | MUSTER | | MKILILINTNNLIK---KIKKEVENQGYQVRDVN-----DSDELKKEMKKLAEEKNFEKILIISNDKQLLISKLGYKVFLLLQDQDENELEEFKRKIESQGKVTDDEEALKIVREFMQKAGSLEHHHHH |
5 | 2gwcA | 0.12 | 0.09 | 3.26 | 0.99 | CNFpred | | --------------------IGTEHEKFGFEVNTLRPMK-YDQIAELLNSIAERFEWEKVMEG---DKIIGLKQGKQSISLEP-GGQFELSG--------APLETLHQTCAEVNSHLYQVKAVMGIGFL |
6 | 5v8wA | 0.15 | 0.09 | 2.88 | 0.41 | HHsearch-2 | | ----------------------------------KPLLSGSIPVEQFVQTLE-KHGFSDIKVEDTA--------KG--HIVLLQAETIQIEEDSTHIICDNDEMLRVRLRDLVLKFLQKF--------- |
7 | 3ie5B | 0.14 | 0.13 | 4.50 | 0.70 | Neff-PPAS | | -----VFKSGEIIEGDGGVGTVTKITFVGHPLTYMLHKFDEIDAANFYCKYTLFEGDVLRDNIEKVVYEVKLEAVGGGSKGKIT---VTYHPKPGCTVNEEEVKIGEKKAYEFYKQVEEYLAANPEVFA |
8 | 2kaeA | 0.13 | 0.05 | 1.62 | 0.47 | HHsearch | | CSNCSVTETIRISGIQCNACFIYQRKY------NKTRPVT------AVNKYQKRKLKVQ---------------------------------------------------------------------- |
9 | 5v8wA | 0.17 | 0.10 | 3.31 | 0.61 | SP3 | | ----------------------------------KPLLSGSIPVEQFVQTLEKH-GFSDIKVEDTAKGHIVLLEAETLIQIEE---------DSTHIICDNDEMLRVRLRDLVLKFLQKF--------- |
10 | 2mblA | 0.11 | 0.08 | 2.83 | 0.47 | PROSPECTOR2 | | MSGKKVEVQVKITCNG-----KTYERTYQLYAVRDEELKEKLKLNERMDPIKKLGC------------------KRVRISIRVKHSD-----------AAEEKKEAKKFAAILNKVFAELYNDSNVTWD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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