Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | KSSKEFYKAMAKQWGITCKMSDHCRCLDCQSHYFDCDYEKDEQEKGDGGLSAGTPMFISEVMHG |
1 | 1kn6A | 0.09 | 0.08 | 3.02 | 0.83 | SPARKS-K | | PGGQEAASAIAEELGYDLLGQIG-----SLENHYLFKHKSHPRRSRR-SALHITKRLSDDDRVT |
2 | 3pzdA2 | 0.03 | 0.03 | 1.80 | 0.28 | FFAS-3D | | -TAGEVVEKLIRGLAMEDYNGHVDKAIESRTVVADVLAKFEKLAATSEVGDLPWKFYFKLYC-- |
3 | 1djiB3 | 0.27 | 0.20 | 6.25 | 0.35 | HHpred | | PSSTEAYIRA---------LCKGCRCLE-----LDCWDGPNEPIIYH-GYTFTSKILFCDVLRA |
4 | 4ykeA | 0.15 | 0.14 | 4.75 | 0.80 | MUSTER | | KPSRKAMYQVMRSLRKNCLGMKPCELEFLSDPAEVFEGAFPHVNYYDPDINVSIPVF---SIHG |
5 | 5dotA | 0.13 | 0.11 | 3.78 | 0.47 | CNFpred | | EKVKDATRKIAKAFAISGPFNVQFLVKGNDVLVIECNLR-----------ASRSFPFVSKTLGV |
6 | 1djiB3 | 0.27 | 0.20 | 6.25 | 0.54 | HHsearch-2 | | PSSTEAYIRAL---------CKGCRCLE-----LDCWDGPNEPIIYH-GYTFTSKILFCDVLRA |
7 | 2wheA1 | 0.11 | 0.11 | 3.92 | 0.77 | Neff-PPAS | | --HFRAWKALAEEIGIDRQFNEQLVSREDSLQKILDLADKKVSAEEFKELAKRKNDNYVKMIQD |
8 | 3kv6D2 | 0.33 | 0.17 | 5.16 | 0.38 | HHsearch | | ------------------KRRN--------WHRHDYT----EIDDGSKPVQAGTRTFIKELRS- |
9 | 1xduA2 | 0.14 | 0.12 | 4.30 | 0.60 | SP3 | | DT----LAGLADRTDTHPQLSRLVRHL-TVVGVLEGGEKGRPLRPTRLGLADGHPAQQRAWLDL |
10 | 2kafA | 0.10 | 0.09 | 3.48 | 0.38 | PROSPECTOR2 | | GSEEHFVETVSLASYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGE---VLSLDKLKSLLS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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