Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | PAEHPFAFTASFVGFCHGCTGIYTRFFDSSCGAEGSEGKCTNRVKKLTSSCMEIITVPLANMDLYRSSKQSSALALGHGLFIIPLAFDLTFKFFATEGDEGESTAILKDLTVLGNIVSLLFFAVNENNLPAGIMSLSAFFSYSGSMVMEYMLNGTEEKSTLAGYALFFACMSSAL |
1 | 4j05A | 0.09 | 0.09 | 3.31 | 0.84 | SPARKS-K | | RNLLGSMLGWFLVDIAFYGINLNQSVVIGFAGKTGDVYDKLFQLATGNIIVTALGFLPGYYFTLFLIDIVGRKKLQFMGFIMSGLFLAILAGEI-DHIGKGPLLACFTFMQFFFNANTTTFIVAAEASAHGISAAAGKCGAILSSLVFNQLKAKIGTSAVLWIFFSTCILGFIST |
2 | 5ys3A | 0.12 | 0.11 | 3.84 | 0.95 | FFAS-3D | | ---NPAPLGLMGFGMTTILLNLHNAGFFALD----------GIILAMGIFYGGIAQI-FAGLLEYKKGNTFGLTAFTYGSFW--LTLVAILLMPKMGLTEAPNAQFLGAYLGLWGVFTLFMFFGTLKAARALQFVFLSLTVLFALLAFGNIAGNEGWIGLVCGASAIYLAMGEVL |
3 | 5tj5A | 0.18 | 0.17 | 5.39 | 0.29 | HHpred | | ------MKLSILMGFIHMTYSYFFSLANHLD-IFIPGLLSVCIVYKWAVDWVKGLLNMLINMFLSPGTIQAQVFLLLMALVCIPWLLLVKPLHFKF--D-IMIHQVIHTIEFCLNCVSHTAS---YLRLWALSLAHAQLSSVLWTMTIQIAFGFRGVFMTVALFAMWFA-LTCAV |
4 | 6eznF | 0.13 | 0.13 | 4.34 | 0.74 | MUSTER | | GRYSSKLYSAYTTWYAIGTVASMQIPFVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKISTAKFKVIMQPVSWPAFFFDTFLIWLFPAGVFLLFLDLKD--------EHVFVIAYSVLCSYFAGVMV-MLTLTPVICVSAAVALSKIFDIYLDFKIKPAALLAKLIVSGSFIFYL |
5 | 5xtcr | 0.06 | 0.05 | 2.21 | 0.95 | CNFpred | | ----AGSMVLAAVLLKLGGYGMMRLTL-----------ILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQ-------------TPWSFTGAVILMIAHGLT---SSLLFCLANSNYERTHSRIMILSQG-LQTLLPLMAFWWLLASLANLA |
6 | 1vt4I3 | 0.12 | 0.09 | 3.20 | 1.19 | HHsearch-2 | | --------------------------EYA-------LHRSIVDHYNIPKTSDDLIP-PYLDQYFYSHIGHIEHPERMTLFRMVFLDRFLEQKIRHDSTAWGSILNTLQQL--------KFYKPYICDNDPKYERLVNAILDF-----LPKIEEICSKYTDLLRMAEDEAIFEEAH |
7 | 5cwqA | 0.08 | 0.07 | 2.94 | 0.79 | Neff-PPAS | | ERGDLKELAEALIEEARAVQELARVACERGN------SEEAERASEKAQRVLEEARKVSEEAREQGD-----DEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEAR |
8 | 3o0rB2 | 0.07 | 0.03 | 1.15 | 0.50 | HHsearch | | EVIEKWLYVIIAMALISGIIGTGHHYFWIGV--P----GYWLWLG-SVFSALEPLPFFAMVLFAFNTINRRRR-D---------------------------------------------------------------------------------------------------- |
9 | 6bhpA | 0.06 | 0.06 | 2.47 | 0.68 | SP3 | | -GLNKFIYVGLVISQLLTLAAYVVVTAGAALLQKKANTLTLFDTQEGIDKYTPVYKEVFTATTYIIAYPQQPQYQFQYQWWIIQFELFVFLLTA--------ACTVFPSIIKRMRPVALTFIASA----LVLVMDNINAIFFLLRNETAKAVFDDYRIATAQAGLIMVGVANGLT |
10 | 5cwmA | 0.08 | 0.07 | 2.99 | 0.80 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELLRQAKEK--GSEEDLEKALRTAEEAAREAKKVLEVVRVAELLLRIAKESGSEEALERALRVAEEAALAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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