Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | CRWHYWSHRNDLAVRQLAKLLEGCPEKVAGFLFDLTLQNYNRLLHPRRCGYSACHVPYCHPYVCERYMGIFDDQGNLRDPTHPRSLFQLLKLLQNFLKGQTPGCVPLPFDSSLREEERAPVMRHRSMDPIGTRCLRWGVTELSGPSRPMQSKQKGKKSPGQLKRKEDDEKSEESKGYAEIRGSLEISPHYRVPGKDGDAVSFYSQDLSDDSRYQLMIDDKGRRRGMGSHSAQLGNLRSEQALYLKRLIAKMNERRRLERDPQKVLRAMSQLDLEDGGPAQDQKTRRNEAVAELSKFYT |
1 | 5yz0A | 0.09 | 0.08 | 3.25 | 0.80 | SPARKS-K | | GLPAQPASTFFSSFLELLKHLVEMDTDQLKLYEEPLSKLIKTLF--PFEAEAYRNIEPVYLNMLLEKLCVMFEDGVLMRLKSDLLKAALCHLLQYFLKFVPAGYESALQVVYVRNICKALLDVLGIEVDAEYLLGPLYAALKMESMEIIEEIQCQTQQENLSSNSDGISPKRRRLSSLNPSKRAPKQTEEIKHVDMNQKSILWSA---LKQKAESLQISLEYSGLKNPVIEMLEGIAVVLQLTVHCSHQNMNCRTFKDCQHKSKKKPSVVITWSLDFYTKVLKSCRSLLESVQKLDLE |
2 | 6exnO | 0.16 | 0.13 | 4.23 | 0.64 | FFAS-3D | | -RWNEFSKEEDAQLLDLARELPNQWRTIADMMAQVCVERYNRLLELKVGDINPNA----------------ETQMARPDNGEKEMLAEARARL-----------------LNTQGKKATRKIRERMLEESKRIAELQKRRELKQAGINVAIKKPKKKYGTDI--------------------------DYNEDIVYEQAPMPGIYDTSTEDRQIKKKFEQFERKVNRKGTEVLLESIQSKVESIEQLQRKLQHVQPLEQQNNEMCSTLCHHSLQEIRSLEGRRKRLQAMLNSSSS--- |
3 | 2pffB | 0.12 | 0.10 | 3.43 | 0.45 | HHpred | | --CPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGVTAVAIAET-----DSWESFFV-SVRKAITVLFFIGVRCYEAYPNTSLPPSILED---SLENNEGVPSPISNLTQEQVQDYVNKTNSHVEISAKNLSPQSLYGLNLTLRKAKAPSGLD----QSRIPFERKFSNRFLPVASPFHVPASDLIKDLVNAKDIQIPVYDTFDGSDLRLSGSSERIVDCIIRLPVKWETFGPGG------ASGLGVLTHRNKDGTGVRV--------------------------------------- |
4 | 1st6A | 0.09 | 0.09 | 3.35 | 0.82 | MUSTER | | KNRNFTVEKMSAEINEIIRVLQLWDEDAWASKDTEAMKRALALIDSKMNQAKGWL-PNAPPQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALT--AKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQRGLVAEGRRLANVMM |
5 | 3woyA | 0.11 | 0.07 | 2.40 | 0.73 | CNFpred | | --------QRANALKKIRSLLVAGYDCFFQHLRLL-DGALKLSAKDL--------RSQVVREACITVAHLSTVLGN----KFDHGAEAIVPTLFNLVPN-----------------SAKVMATSGCA------AIRFIIRHTHVP-----------------------------------------------------------------RLIPLITSN---------CTSKSVPVRRRSFEFLDLLLQEWQTH-SLERHAAVLVETIKKGIHD---ADAEARVEARKTYMGLRNHFP |
6 | 1vt4I | 0.12 | 0.11 | 4.02 | 0.74 | HHsearch-2 | | TLRLFWTLLNYKFLMSPIKTEQRQPSMMTRRLYNSRLQPYLKLLRPAKIFWLNLKNCNSPETVLEMLQKLLYIDPNWTSRSHSSNIKLRIHSIQAELRRKPYECLLVLLNNAFNLSCKTTTHSMTLVKSLRPQDLPREVLT-TNPRRLSIIAESRDGLATWDNWK-H----VNCDKLTIIESLNVLEPAEY-RKMFDRLSVFPPSAHIFDVSVMVVVNSLVEKQPKESTI----SIPS---IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP----YLDQYFYSHIGHHLKN |
7 | 6gy6B | 0.08 | 0.08 | 3.03 | 1.05 | Neff-PPAS | | -IINDKVKRISAYSREFDEMMRDSLAQLAPVLKQLTSDAAFQTIALADPSLS------------KDDREALTLERNNLIQNLSKHIDNVIVSFTGRTSKLTNKISDISDMVIAER----LQDLVTQTESQKTELQSDIDPKTEKRNKLDADREKIIESQDVIRQNNIADMFKDFIPSAKDIDGLDFTQPKKEAIKQAIKQGAEIARKILGKVSEGLKYIDLADARETDELKAKIREVELRLSGLKDVMQIDTERTTLLTEAVKIEQVWISFQLHKLSNDEINQQDLSNLINGQLDFLN |
8 | 6c4rA3 | 0.13 | 0.03 | 1.04 | 0.40 | HHsearch | | MPSED--YYRTAMIQHIGKMLGIKTPMIDQFLYEASCQAYKD-MHQDQQLSSQFNTNLFEGDKVTKFLEIN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 1st6A | 0.11 | 0.10 | 3.74 | 0.66 | SP3 | | WDEDAWASKDTEAMKRALALIDSKMNQAKGWLRD-----------PNAPPGDA------GEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISA--LTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLAN |
10 | 3l0mA | 0.12 | 0.11 | 3.90 | 0.89 | PROSPECTOR2 | | PLGSPYSDAEVAKIRELGVQRVTRIENLENAKISGYLKAANELHKFKEKNLK-----------EDDLRPELSDKTI--SPKGYAILQSLWGAASDYSRAAATLTKSAFFDCKLSPNERATPDPDFKVGKSKILVGIQFIKDVADPTSKIWHNTKALNHKIAAIQKLERSNNVNDETLESVLSSKGENLSEYLSYKYATKDEGREHRYTASTENFKNVKEKYQQRG---------------DALKTEILADFKDKLAEATDEQSLKQIVAELKSKDLKTSSVSSFEKVEETRESIKSQE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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