Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | SWDVADLLPHLQDEAINVDELQMIKRHHLAELLSNFRFGTRIRFEHHLERWRRWLNVPLQGVQGQSQTHCQGCRCAESAAPSIICHPQMGGQSDSAADSGKSDDLAKTLPAEPLVSLTDPRETVQAPFHIPMQPQLEPSEILSTTLVTNVKEEDSGDQVTGEDRVVTVLGILQAGGMKSQSLLDRLGQQEALDAVQRLLLIQLICSYYEDNQLHLTLQRSHLLEREILQLFPKEQLQYYRTERRGKIYVRFTNMKRNKR |
1 | 2gafD3 | 0.14 | 0.10 | 3.56 | 0.87 | SPARKS-K | | -TSMEELARDMLNSMNVANMIKMFQIDRLEDLSKDPE-KFNARMATMLEYVRYTHGIVFDGK---RNNMPMKCIIDENNRIVTVTTKDYFSFKKCLVDENVLSSDILDLNADTSCDFE----------------SVTNSVYLIH-----------------DNIMYTYFSIL-------------LSDKGKVHEISARGLCAHILLYQMLTSGEYK----QCLSDLLNSMMNRDKIPIYSHTERDKKP----------- |
2 | 3k1rB | 0.19 | 0.05 | 1.49 | 0.66 | FFAS-3D | | SLHMEDFAALLRQEKIDLEALMLCSDLDLRSI--SVPLGPREKILGAVRRRRQAMERPPALEDTE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 2d8cA | 0.13 | 0.03 | 1.20 | 0.32 | HHpred | | YWSPKKVADWLLEEHFTGQDLINLTQEDFKKPLYRVSSDNGQRLLDMIETLKMEHHMEAHKNSGPSSG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5mqfM | 0.09 | 0.09 | 3.48 | 0.87 | MUSTER | | NYQLWHELCDLISQNPDKVQSLNV-DAIIRGGLTRFTDQL-GKLWCSLADYYIRSGHFIRTVMTVRAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGDDARVILEKATKVNFKQVDDLASVWCQCGELELRHE---NYDEALRLLRKATALPARRAEYFDGSEPVQKVWSMLADLEESLG |
5 | 5zabA | 0.09 | 0.05 | 2.03 | 0.63 | CNFpred | | --RHKHMFNFLDNGKISLDEMVYKASDIVINNLG--TPEQAKRHKDAVEAFFGGAGMKY-------------------------------------------------------------------------------------------------------GVETDWPAYIEGWKKLATDELEKYAKN---EPTLIRIWGDALFDIVDKDNGAITLDEWKAYTKAAGIIQSSEDCEETFRDESGQLDVDMTRQHLGFW |
6 | 2eaoA | 0.06 | 0.02 | 0.68 | 0.64 | HHsearch-2 | | AIKMVQYRDSFLTAGFTLQLVTQMTSEDLLRIIT--LAGHQKKILNSIHSMRVQISQSPTAMASG--------------------------------------------PSSG-------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 2tmaA | 0.09 | 0.08 | 3.28 | 1.10 | Neff-PPAS | | --NALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKEDELDKYSEALKDAQEKLELAEKKADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKV--LSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL |
8 | 5jrtA | 0.19 | 0.04 | 1.25 | 0.88 | HHsearch | | NLGLEHLMDIFEREQITLRVLVEMGHKELKEIIN--AYGHREKLIKGVERLISGQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
9 | 3k1rB | 0.19 | 0.05 | 1.49 | 0.94 | SP3 | | SLHMEDFAALLRQEKIDLEALMLCSDLDLRSIVP---LGPREKILGAVRRRRQAMERPPALEDTEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3iz3A1 | 0.11 | 0.10 | 3.66 | 0.82 | PROSPECTOR2 | | SIAVEDMYGYVLDDIWPADEQIEQKGDAVALYDTKTSVRIDDLLSPLLSLVYRTYIKGDTMTMTQGSLLCAAVDSDITFVGNRMIAPLPEGYIPKPMHRNNSALKKLENFATNSYLMAPDTAVNILRRFNRNVSNVRIIGMGDRAVEPNIRVRVPFPIDKNISADFIICDINSYEDQSFESMFSET--------------ISVVTTCASAATRHPSEYMINSVIERLSQLYSYETYIYITPIAAAVMINRYMTAVAEMP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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