Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | DNLVQQVMQRLEERKHTSVEVTFNHQVAPPSEQIFLRNGKVILKDISIELITDLYSMEKTNAWVKWVLEGISYDVKFYFLINEQMVNFIPRMMILDWPILFVVNNESPVIASYNRIITREEIAAKPDKSILVRYQKQHITDEALDICNYKKIK |
1 | 6qlgC | 0.08 | 0.07 | 2.84 | 0.77 | SPARKS-K | | AMLGIKVLIALRRLNVETHLVMADYVHNINDMPVSFRADGMIVVPCSMKTLAAIHSGFCDDLISRTADVMLKERRRLVLVARETPLSEINMLEVTRAGAVIFPPVPAFYIKAGSDQSVGRMLDLFDLDTGDFERWNGW--------------- |
2 | 3jsyA | 0.13 | 0.13 | 4.50 | 0.62 | FFAS-3D | | IEEVKTLKGLIKS-KPVVAIVDMMDVPAPQLQEIRDKIDKVKLRMSRNTLIIRALKEELNNPKLAELANYVERGAAILVT---DMNPFKLYKLLEENKSPAPVRGGQSTGMPPGPFLGELKSVGIPKEDKVVVKKGEVVSPKLAAVLDRLGIK |
3 | 2ejbA | 0.13 | 0.10 | 3.60 | 0.71 | HHpred | | --YGIKLLQVLEEL-DFSVDLVISRNAKGKNVRILVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVRE--APYNEMLKITRMGGVVVPASPA----FYHKPQSIDDMINFVVG------------------------- |
4 | 1v4vA | 0.09 | 0.08 | 3.25 | 0.62 | MUSTER | | EATKAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVQERQALPDLAA--RILPQAARALKEGADYVLVHGDTLTTFAVAWAAFLEGIVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAP----TPLAKANLLKEGKR |
5 | 4rhfA | 0.09 | 0.08 | 2.99 | 0.73 | CNFpred | | PDAASKFLTEKYQAKDQQITVFGKEQWFSPVASGSSAPKQMVVCPCSTGTMAAICHGMSDNLIERAADVVIKERGQLILMVRETPFSLQNMLSLSQQGVTIMP----ASPGFYHKVETIEDLID----------------FMVGRVLDHLGIE |
6 | 2ejbA | 0.13 | 0.11 | 3.85 | 0.70 | HHsearch-2 | | VIYGIKLLQVLEEL-DFSVDLVISRNDFTSPLSRLVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVRE--APYNEMLKITRMGGVVVPASP----AFYHKPQSIDDMIN----------------FVVGKLLDVLRIE |
7 | 3canA | 0.10 | 0.08 | 3.16 | 0.66 | Neff-PPAS | | PEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVNCELLLIDL-KSDSTVHQTFCDVP-NELILKNIRRVAEADFPYYIRIPLIEGVNADEKNIKLS-AEFLASLPRHP-----------------EIINLLPYHDKQTPQQCIQILTDYGLK |
8 | 2ejbA | 0.13 | 0.11 | 3.84 | 1.26 | HHsearch | | VIYGIKLLQVLEEL-DFSVDLVISRNAKGFTSSRLVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVRE--APYNEMLKITRMGGVVVPASP----AFYHKPQSIDDMINFVVGK----------------LLDVLRI- |
9 | 2ejbA | 0.14 | 0.12 | 4.22 | 0.74 | SP3 | | VIYGIKLLQVLEELDFSVDLVILKEEVLKGSGSRLVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVREAPYNEIHMLKITRMGGVVVPASPA----FYHKPQSIDDMIN----------------FVVGKLLDVLRIE |
10 | 3wisA | 0.06 | 0.05 | 2.32 | 0.58 | PROSPECTOR2 | | FKLLDESIALALERLRKHFRVFRDNSASGVPVGMLYHGMYVVIAPATSNTVAKCAFGISDTLPTNMYAQAGKQCIPGIVFACD-------------TEPTVVTQSPNEWVELRPRAIELDNVERLRFEYTTLVRSLDELKAALGERLSTLD-L |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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