Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | GYTDSDAGWLYLQRYVKFNYTSKRISPTERQYRISKWESSASSIDQSPDVIFDYFMREMSDSHDGLFLNAQRLNDKALLLSSINSPLFIC |
1 | 4lqzA | 0.13 | 0.13 | 4.59 | 0.77 | SPARKS-K | | ENLYFQGQRFEIQQSIYFYAHIRGIEKGTAKYFIDKVEYIPDNVLNCKPDFWK-TLKYKKDKVTYYVYLIENLDDEVFHLSALQDNRIPI |
2 | 4b6lA1 | 0.12 | 0.10 | 3.54 | 0.50 | FFAS-3D | | ----RSGRTYLKGRLLGKRCYEATDTETGSAYAVKVIPQSRVAKPHQREKILNEIHRDLQHRHIVRFSHHFEDADNIYIF---------- |
3 | 4qrlA | 0.13 | 0.10 | 3.47 | 0.21 | HHpred | | -----QKGSFSALTTFFGNYSLK-----GAEISIILLPE------SVNDK---NYDTYFGWPEGKCTFKVEDLSYSSLRLEYEGTKSI-- |
4 | 1ej6A5 | 0.07 | 0.07 | 2.73 | 0.74 | MUSTER | | ---MEKRGNFIVGQNCSLVIPGF---NAQDVFNCYFNSALAFSTEDVNAAMIPQVSAQFDATKGEWTLDMVFSDATMQALVGSNANPVSL |
5 | 5oglA | 0.09 | 0.08 | 2.98 | 0.67 | CNFpred | | RSLKIEGNSIPLKAFVDIESITNGKFYY-AQIYLLYLREY--SYVILDESLYNSSYIQMFL-YDQDLFEQITNDTRAKIYRLK------- |
6 | 3vu1A2 | 0.16 | 0.14 | 4.79 | 0.51 | HHsearch-2 | | GRLELKVADLYLRATFIYLVRKGGKSNEDDTFFITKLKIKLRPGEEMPKNAISSYKEKLEKE----------HGDKLIIRGIRVEPVFIV |
7 | 2k5vA | 0.07 | 0.07 | 2.76 | 0.77 | Neff-PPAS | | ----MPNLSGTINAEVVAAYPKKEFSRKDGTKGQLKSLFLKDDTGSIRGTLWNELADFEVKKGDEVSGYVKQGYSGLEISVDNIGIIEKS |
8 | 3n8bA | 0.17 | 0.12 | 4.01 | 0.42 | HHsearch | | GEVYSEKFT-ESERTY-FNVKEN----RKGDYFLNIVESKRSPSGD------------F----ERHSIFVYEEN-NEFESN--LLKAII- |
9 | 4qrlA | 0.10 | 0.10 | 3.69 | 0.66 | SP3 | | GQYQYADGTSEKVDSVFYNFQKGICLLKDGGLTTFFGNYSLKGAEILLPESVNNYDTYFGWPEGKCTFKVEDLSYSSLRLEYEGT-KSIF |
10 | 4fe9A1 | 0.09 | 0.09 | 3.40 | 0.42 | PROSPECTOR2 | | GQLTGKDASIVMDASVEIAKLSSTTAEEGSKIAVNSLTLNENHTIPFSMAQLDSVTQEAYKSRASINASAVTPSGEGIQLVGNEVSITLT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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