Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | DSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKNSILKDAMAAGTPKSILLSASIKREGDSPTASPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCNRPLSGSEEEMSRHVEQCLAKREGSCMTEDDSVDIENENGNRFEEYEWCGQKRIRATTLLEGGFRGSGFIMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADVIPCTGEEPGEAKEREALRGAVLNGGTPST |
1 | 2tmaA | 0.07 | 0.07 | 2.94 | 1.51 | Neff-PPAS | | DKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHA |
2 | 5vf0B | 0.28 | 0.05 | 1.47 | 1.06 | HHsearch | | -----------------------------------------------------------------------------------------------------------QVTKVDCPVCGVNIP--ESHINKHLDSCLSREEKKESLRS-S-----------------VHKR-------------------------------------------------------------------------------- |
3 | 5mqfM | 0.09 | 0.08 | 2.94 | 0.84 | SPARKS-K | | PETAVRGYRRFLKLSPESAEEYIEYLKDEAAQRLATNDERFVSKAGK---SNYQLWHELCDLISQNPDKVQSLNTDQLGKLWCSLADYYIRHFEKARDVYEEAIRTVMTVR---------------DFTQVFDSYAQFEESMIAAKMETAREEEDDVDLELRLARFEQL------ISRRPLLLNSVLLRQNPHHVHEWVALHQGRPREII---NTYTEAQTVDPFKATGKPHTLWVAFAKFYEDNGQLDD |
4 | 3jc5A | 0.09 | 0.07 | 2.59 | 0.71 | FFAS-3D | | -----------------DLGNKLVLEAKRTKQLYARSEDIIRNILKEVSNLRKNTEYLKEQQQLGMLDDKVAKCLLCMERNKRCLLAYQRLRTDILDSMAWNNNGLDLMSSITFSQQDTNNLSHQEQLKEYCDLITDLKSGDLVDIDLSGSLVPPSDA-----------FIDVRVLKDAG-------------------EIQTEY------GVFNLIKDSQF---------FVQQSDVERLIQQGYLQLI |
5 | 6o9l3 | 0.14 | 0.11 | 3.84 | 0.40 | HHpred | | -RGAGNCPECGTPLRKSNFRVQVDKEVEIRKKVLKIYNKR-EEDFPNNVDLDNTKKKMEIYQKENKDV---IQKNKLKLTREELEEALEVERQRRLFIQILKRNKELESSD---------L-PVALLLAQHKDRSTQLEMQLEK---P-K------PV-------------KPVTF-STGIKMGQLAPIH--K---LEEALYEYQPLQIETYGPHYLNH-VRAASPQDTSSLACHRALQDAFSGLFWQPS |
6 | 4e40A | 0.11 | 0.10 | 3.64 | 0.72 | MUSTER | | DSDDVA--ACELRAQLAGVSIASGILLRPAVIRNATTEFSRKKSED----ILAKGGAAVERASAAVDRVSGLDKTNETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLARAKESENQYVKEAAEECSESTNYDVTAKS-LAAALDKLPGVKEDNAVKTTFQSILTSLDNLDKDVKSVEQ------AEELETALEKAERQLEKAEKAAEEAETESSKV-- |
7 | 5goxA | 0.14 | 0.05 | 1.78 | 0.52 | CNFpred | | -----------------HINNELKRKEEQLSSYEDKL-----------------------------------FDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATA-ENQSCCPVCQRVFQ-TEAELQEVISDLQSKLRLAPDKLKS------------------------------------------------------------------------------------------------------ |
8 | 5vf0B | 0.26 | 0.04 | 1.36 | 0.93 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------------QVTKVDCPVCGVNIP--ESHINKHLDSCLSREEKKESLRS------------------SVHKR-------------------------------------------------------------------------------- |
9 | 5nnvA | 0.08 | 0.06 | 2.58 | 1.18 | Neff-PPAS | | --------------EELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVK-EKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSES----------------------SSTSGEEKLEEAAKHKLNDKTKTIEALRRDQRIKLQHGLDTYERELK |
10 | 3wwqF | 0.27 | 0.04 | 1.23 | 0.61 | HHsearch | | ------------------------------------------------------------------------------------------------------------AALRSCPMCQKEFAPTQLDVDSHLAQCLAESTE---------DV-----------TW------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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