Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MGGGRGLLGRETLGPGGGCSGEGPLCYWPPPGSPPAPSLRASLPLEPPRCPLRSCSLPRSACLCSRNSAPGSCCRPWASLWSEPPPSPSSQPAPPMYIWTLSCAPAASWAPVTHWTDHPLPPLPSPLLPTRLPDDYIILPTDLRCHSHRHPSHPTDRLLLLVIWTHLGGIWAGHSPWTVIQTAGRPPRDLSPSARPISSPPPETSCVLA |
1 | 1m11R | 0.10 | 0.10 | 3.54 | 1.31 | Neff-PPAS | | -NAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWDIEEFCNRSCEVPTR----LNSASLKQPYITQNYFPVGTVVEYECRPREPSLSPKLTCLQNLKWSTAVEFKKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTKLFGSTSS-----FCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSV |
2 | 4k0mC | 0.07 | 0.06 | 2.59 | 1.24 | PROSPECTOR2 | | KVYT----IDEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
3 | 5fvmC | 0.11 | 0.11 | 3.80 | 0.93 | SPARKS-K | | FEGHKGNVTSIAFQQENRWSEDGTIKVWDVRSPSV----QRNYKHNAPVNEVAIHPNQGELISCDQDGN----IRIWDLGENQCTNQLTPEDNTPLQSLSVAMLVAGNNKGNCYVWRMPHHTDASTLEPVTKFKSHTKYITRVLLSADVKNLATCSADHTARVWNIEDNYQDGHQRWVWDCAFSADSAYLTACSDDLSTSEIVRQYGGH |
4 | 2gycA | 0.16 | 0.15 | 4.91 | 0.51 | FFAS-3D | | KSGGRNNNGRITTHIGGGHKQA----YRIVDFKRNKDGIPAVV-ERLEYDPNRSANIERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAVDHTPW------GVQTKGKKTRSNKRTDK--------- |
5 | 5z34A | 0.16 | 0.10 | 3.18 | 0.31 | HHpred | | ---------------------------------------------LATPCDEEACKLP--DCRCSSTNIPGG-------LRAR--------DTPQFVTVTFDDGINVINETYREVLYRSNPAGATFYVSHE--YTNYQLVNELYLHSISHRTPQARQMAPIKGVRIPFLQMSGNTSFQVMADFDLLYD--------------------- |
6 | 6d4hA | 0.10 | 0.10 | 3.71 | 0.95 | MUSTER | | KEEGANVLTTEHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKA |
7 | 1jroB4 | 0.19 | 0.11 | 3.40 | 0.39 | HHsearch-2 | | -----------------------------SVGKPPHDSARAHVTGQARYLDDLPCPANTLEHFYL---EGQAALALPAE-------------GG-VVIHCSSQHPSEIQHKVAHA--------------LGLAFHD-----------------------VRVEMRRMGGGFGGKESQHAIACTGRPCKMRYDDDDMVIT---------- |
8 | 1dgiR | 0.11 | 0.11 | 3.80 | 1.30 | Neff-PPAS | | --QVPNMEVTHVSQHGESGSMAV---FHQTQGPSYSESKRLEFVAARLGAELRNASLREGNYTCLFVTFPQGSRSVDIWLRPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWIL----VPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDA |
9 | 2ch9A | 0.14 | 0.06 | 1.97 | 0.39 | HHsearch | | --------------------------------------------------------------TCSQDLNSRVKPGFPKTIKTNDPGVLQNCTNDMFLF-KESRITRALVKGLKYMLEVEKNQH-LRLDDCDFQTSCHFEVPVLRCHHHHHH---------------------------------------------------------- |
10 | 2nbiA | 0.22 | 0.22 | 6.94 | 0.71 | SP3 | | ATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEIEECPLDTCFLPTSDCTCDVLPFPNNLGCPACCPFECSPDNPMFTPSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMSPDGSPPICSPTMMPSPEPSSQPS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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