>PF15882 (301 residues) DGVYGLRMLQGAVNVILQENKIGQIHIPIEKQKRILKLAVVASNIARKTYPYLKKFDENY FEMMGFTVMEPWKNIQPFKKLNLHRSDNPTSASDDDDGYEMEEDKQDRCFNALVGDTKKG IKPCSISBICWKVNTKPNQKSYTLTHQLLFFMLGQVKGCSKVFDSRFKADGYDGGIERFF ATSCHAMYPEMIDQEKIAIKKKRLGEIDLYMEQXVICGMIGYTDFFSLERLNYILGWRHK DGCFGFTDEIGGKEDDEDSYGDKEGMTTMRKLTVTRDLEGGCEVHATGVGTGLLALYLRW L |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DGVYGLRMLQGAVNVILQENKIGQIHIPIEKQKRILKLAVVASNIARKTYPYLKKFDENYFEMMGFTVMEPWKNIQPFKKLNLHRSDNPTSASDDDDGYEMEEDKQDRCFNALVGDTKKGIKPCSISBICWKVNTKPNQKSYTLTHQLLFFMLGQVKGCSKVFDSRFKADGYDGGIERFFATSCHAMYPEMIDQEKIAIKKKRLGEIDLYMEQXVICGMIGYTDFFSLERLNYILGWRHKDGCFGFTDEIGGKEDDEDSYGDKEGMTTMRKLTVTRDLEGGCEVHATGVGTGLLALYLRWL | |||||||||||||||||||
1 | 4fgvA | 0.08 | 0.08 | 2.97 | 0.81 | SPARKS-K | --ENNMIILRLLSEEVFDYSADQ--MTSTKTRNLKSTMCAEFSMIFQLCQEILNSTQPSLIKATLETLLRFCNWIPLGYIFETPLIDTLRTRFLEVPE---FRNVTLQCLTEIGGQTGGPGQPHTYDEQLIKMFT-------EVLTTISNII-------PLQMDLKATYPNSNSRDQEFIQNLALFLTSFFTMHLPLIENLPNRDFLTHGHFYLIRISQIDDREIFKLDYWLKLVQ--------ELYEEMQSLPLNDMSSMGLGMMSGGGAPNPALLEHPLRKHKYKEVLSNLRVVMIEKM | |||||||||||||
2 | 5fsaA | 0.08 | 0.07 | 2.83 | 0.72 | FFAS-3D | -----VPKIREEILNYFVTDESFKLKEKTNVMKTQPEITIFTASRSDEMRRIFDRSFAQLYSDLDKGFTPINFVFPNLPLPHYWRRDA-------------AQKKISATYMKEIKLRRERGDIDPNRDLIDSLLIHVKMTDQEIANLLIGILMGGQHTSASTSA---------WFLLHLGEK--PHLQDVIYQEVVELLKEKGGDLNDLTYE-----------DLQKLPSVNNTIKFDNPEDFWDTAAAKANSVSFNSSDEVDYGFGKVSKGVSSPYLPFGCIGEQ--FAYVQLGTILTTF | |||||||||||||
3 | 1vt4I | 0.09 | 0.08 | 2.93 | 0.43 | HHpred | DGVLGLDVCETVLEMLQKNWTSR-SDHSSNIKLRIHSIQAELRRLLKSK-PYLNVQNAKAWNAF----------NLSCKILLTVTDFLSAATTTHSLDHHSMTLTPDEVKSLLLKY-----LDCRPQDLPREVLTT--------NPRRLSIIAESIRDGLATWDNWKH-VNC-DKLT-TIIESSLNVLEPAEYRKMDRLSVFPPSAHIPTILLS-----LIWFDVIKSDVMVVVNKLHKY-SLVEKQPKESTISIPSIVKLENEYALHRSIVDHYPPYLDQYFYSHIGHHLKNI------- | |||||||||||||
4 | 5cwmA | 0.13 | 0.10 | 3.44 | 0.69 | MUSTER | DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEDPEVALRAVELVVRV------------------AELLLRIAKESGSEEALERALRVAEEAAR-------LAKRVLELAEKQGD------PEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGD---------PEVARRAVELVKRV--AELLERIARES---------GSEEAKERAERVREEARELQERVKELRER------------------------- | |||||||||||||
5 | 1vt4I | 0.09 | 0.09 | 3.39 | 0.70 | HHsearch-2 | DAVSGTLMVQKFVEEVLRITEQRQPSMMTRMYIEQDRLYNDNQPYLKLRQALLELRPANSPETVLEMLQKLYQIDPNWTSRSDHSSHKPYENLLNKILLTTRFKQVTDFLSAATTTHSLDHHSMTLTPDEVKSLKYLDCRPQDLPREVLSIIAESIRDGLATWDNWKH-VNC-DKLTT-IIESSLNVLEPAEYRKMDRLSVFPPSHIPTILLSL------IWFDVIKSDYLELKVKLENEYALHRSIVDHYLDQYKNIEHPMLDFRFLEQKIRHDSYKPYICDNDPKYELVNAILDFLPKI | |||||||||||||
6 | 5cwmA | 0.13 | 0.10 | 3.44 | 0.48 | Neff-PPAS | DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEDPEVALRAVELVVRV------------------AELLLRIAKESGSEEALERALRVAEEAAR-------LAKRVLELAEKQGD------PEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGD---------PEVARRAVELVKRV--AELLERIARES---------GSEEAKERAERVREEARELQERVKELRER------------------------- | |||||||||||||
7 | 1vt4I | 0.15 | 0.13 | 4.46 | 1.07 | HHsearch | DH-HSMTLTPDEVKSLLLKYLDCPQDLPREVLRRLSIIAEKLTTIIESSLNVLE---PAEYRKM-------F---DRLSVFPPSAHI-PTI---LLSLIWFDVIKSDVMVNKLHKYSLKQPKEISIPSIYLELK-VKLENEYALHRSIVHYNIPKTFDSDDLIP------------PYLDQYFYSHIGHHLKNIEHPRMTLFRMQQLKFYKPYI--CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEA-----IFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGG- | |||||||||||||
8 | 4fgvA | 0.08 | 0.08 | 2.97 | 0.70 | SP3 | --ENNMIILRLLSEEVFDYSADQ--MTSTKTRNLKSTMCAEFSMIFQLCQEILNSTQPSLIKATLETLLRFCNWIPLGYIFETPLIDTLRTRFLEVPE---FRNVTLQCLTEIGGQTGGPGQPHTYDEQLIKMFT-------EVLTTISNII-------PLQMDLKATYPNSNSRDQEFIQNLALFLTSFFTMHLPLIENLPNRDFLTHGHFYLIRISQIDDREIFKLDYWLKLVQ--------ELYEEMQSLPLNDMSSMGLGMMSGGGAPNPALLEHPLRKHKYKEVLSNLRVVMIEKM | |||||||||||||
9 | 2sqca1 | 0.10 | 0.09 | 3.33 | 0.91 | PROSPECTOR2 | APAY-ARTLDRAVEYLLSCQKDEGYWWGPLIS----PVWDTGLAVLALRAAGLPADHDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYRLPDERRRRDAMTKGFPFSDFGEVTDPPSEDVECFGSFGYDDAWKVIRRAVEYLKREQKPGTGAVVSALKAVGIDTREPYI-QKALDWVEQHEDCRSYEDPAYAGKGASTPSQ---TAWALMALIAGAESEAARRGVQYQRPDGGWDEPYYTGTGFPGDFYL--------------------GYTMYRHVFPTLALGRYKQAI | |||||||||||||
10 | 5lpiD | 0.13 | 0.05 | 1.74 | 0.51 | FFAS03 | -------------------------------------------------------------------------------------------------------------------DEHYLDNLCIFCGERSEEFTEEGLDLHYWKH-----MLTRCDHCKQVVEISSLTEHLLTECDKKDGYRCSEAVFKEELPRHIKHKDCNPAKPEKLANRCPLCHEN------EEAWKAHLMG---PAGCTMNLRK---------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |