Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | GFFNYLTYFLAAGAVTLGIGFFALASALWFLICKRREIFQNSKFKAIDERCRQRPSMAKIKSHSQCVFISRNFHTGRFQLQEEQRKKEAAHIKAIKDHSKDEPQLATKNIICDPSETSSATNRSSVTLSLSTLPSDSYYSQSIEAADDWFSDDSLVKRNSPMPCLGEPLMEKVFSYLSTISLEE |
1 | 5yfpB | 0.11 | 0.10 | 3.76 | 1.07 | SPARKS-K | | GLTDSPTIIEMWLLILKYINDLWKICDQFIEFWEHIEKFLDGTYQINEKRKENILIGDSNIIESY-----QKSLILKEEQINEVRLKGEEFITSVSQNLISFFTSSQSSLPSSLKDSTGDITRSNKDSGSPLDYGFIPPNCNGLSCLRYLPKEPILKFSTELAQLNITGITICRNTLSTIINRC |
2 | 1g8xA3 | 0.10 | 0.08 | 2.79 | 0.51 | FFAS-3D | | GQLARIEEARRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNA------------HKEYKKTEKPPKGQEVSELEAIYNSLQTK-------------------LRLIKREPF------VAPAGLTPNEIDST--W---SALEK----AEQEHAEALRIELKRQKKIA--- |
3 | 5id3A | 0.18 | 0.08 | 2.48 | 0.36 | HHpred | | GLFARVTYFATYSTVAATFGY--------YLYTQQ-SF----EYPSARERVYTKQFYRR--------AQKQNFDIEKYNRLVTEVDELRNQLKRLRDPL------------------------------------------------------------------------------------- |
4 | 6etxG | 0.13 | 0.13 | 4.51 | 0.79 | MUSTER | | SFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVN---FPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRTSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPE |
5 | 2uv8G | 0.16 | 0.05 | 1.63 | 0.57 | CNFpred | | --KDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGAT---------------GHSQGLVTAVAIA-------------------------------------------------------------------------------------------------------------- |
6 | 5id3A | 0.19 | 0.08 | 2.63 | 0.44 | HHsearch-2 | | GLFARLTYFATYSTVAATFGYY--------LYTQQSFEYPS-----ARERVYTKQFYR--------RAQKQNFDIEKYNRLVTEVDELRNQLKRLRDPLE------------------------------------------------------------------------------------ |
7 | 3r20A | 0.08 | 0.08 | 2.98 | 0.83 | Neff-PPAS | | -----KSSVSRGLARALGARYLDTGAMYRIATLAVLRAGADLTDPAAIEKAAADEIGVGSDPDVDAAFLASEIRGDAVTGAVSAVSAVPAVRTRLVDIQRKLATEGGRVVVEGRDIGTVVLPDADVKIFLTA---------SAEERARRRNAQNVANGLPDDYATVLADVQRRDHLDSTRPVSP |
8 | 2k9yA | 0.19 | 0.04 | 1.23 | 0.53 | HHsearch | | LSPEGSGNLAVIGGVAVGVVLLLVLAGVGFFIHRRRK--------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2c9yA | 0.09 | 0.09 | 3.33 | 0.59 | SP3 | | GQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTQAEMLDDLMEKRDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKAYHTQTTPLIEYYRKRGIHSADASQTP--DVVFASILAAFSKATC-- |
10 | 3r20A | 0.08 | 0.08 | 3.00 | 0.71 | PROSPECTOR2 | | SLVSSVSRGLAR---ALGARYLDTGAMYRIATLAVLRAADLTDPAAIEKAAADAEIGVGSDPDVDAAFLAGEDVSSEIRGDAVTGAVSAVSRTRLVDIQRKLATEGGRVVVEGRDIGTVVLPDADVKIFLTASAVANGLPDDYATVLADVQRDHLDSTRPVSPLRAADVIAHLLDLV------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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