Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MWKGGRSHPFLPHSSRCAGSGGQLDSILPHQSPAWGPWGCKDLSSGFPSFLTSSILWKSAVV |
1 | 5njtP | 0.21 | 0.21 | 6.66 | 1.09 | SPARKS-K | | KRMGAKKSPFVVADSRSPRDGRTVGTYNPVAKPAEVKIDEELLQTGKPSDTVRNLFSSQGIM |
2 | 4cbfB | 0.13 | 0.13 | 4.48 | 1.06 | Neff-PPAS | | MGLETRAETWMSSEGAWKHAQRVESWILPGFALLAGFMAYMIGQTGIQRTVFFVLMMLVAPS |
3 | 6bx8B | 0.08 | 0.06 | 2.58 | 1.00 | SPARKS-K | | -----MHSFCAFKADDGPCRACMKRFFFNIFTRQCEEGGCEGNQNRFESLEECKKMC----- |
4 | 2ftcD1 | 0.21 | 0.19 | 6.13 | 0.36 | FFAS-3D | | --RGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKLKVALTVK---- |
5 | 3u3iA2 | 0.19 | 0.10 | 3.13 | 0.32 | HHpred | | -----------------------KGKYIMAFNPPWGDINKSG-RSGIALVATGLAK------ |
6 | 1sqqI | 0.25 | 0.23 | 6.98 | 0.90 | MUSTER | | LSVAARSGPFAPVSATSRGVAGALRPLVQAAVPATSE---SPVLDLKRSVLCRESLRG---- |
7 | 5xjyA | 0.15 | 0.05 | 1.63 | 0.40 | CNFpred | | ------------------------------------------LTTSVSMMLFDTFLYGVMTW |
8 | 6cgrk1 | 0.22 | 0.21 | 6.60 | 0.40 | HHsearch-2 | | LWSR---RSISVVLRHHYGTKQRFVVVSYENSVAWGGRRARPLSSALATALTEACA-AERVV |
9 | 1p58D | 0.12 | 0.10 | 3.44 | 1.03 | Neff-PPAS | | -----------EGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTHFQRVLIFILLTAIAPS |
10 | 3u3iA2 | 0.13 | 0.10 | 3.35 | 0.53 | HHsearch | | --------------REHVEWEFVKGKYIMAFNPPWGDINKSG-RSGIALVATGLAKLAETK- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|