>PF15785 (608 residues) MWVLQPSIVDLLAVRLMPKKLSKLPPDLQYALLYMLYSHCSKHNHFISSSGLLSAVKGRP SVSDIFGTALGFDVSHNSPMSGHLSVILGLLANIIVEETSFECKQLVLGWTCELLRATKA YMATLSATSELQQLADALLSNGGVASSCQPTIAQLACACLEQLVAPQMNWKSDRLMAILE VCMLQISSTDEVVSARFCQLMMRLPWTFVISGMQVALTKHKSPCWKRTAAERSHLTRGTN GEMQTQQFKQFMAFLLQGHNQSSDLQWLREVFSVCWSVCEPSSDVSVFAHASTPMLLSWA TWETAQLCISCKLRTPLGKPLDTFMAFEGAIKGLARETTSTAHKAVTESSLDESGGCSPT YNLRRVRLLIELVEQLEKTMYNAADGTATALVAPTKPVRTFFHTNKSTCGEWLARIRLAV VVVSLHCGLAASAVRNGHCLLQDLLDSGNTQGPELETAVLYVAWGLSRLHEAEAVQGLYA WCRDTLKCKFAFLKPIVEHAASRYETAIDQYKMVLNNEAFDSPAKSSAAVSDDVERKTSL NNIAHILRPLVADQLTECYLALQDWSGLQKWKEMEAEYILNQNGNASKRFKHVTETSARA LQAFDEGD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MWVLQPSIVDLLAVRLMPKKLSKLPPDLQYALLYMLYSHCSKHNHFISSSGLLSAVKGRPSVSDIFGTALGFDVSHNSPMSGHLSVILGLLANIIVEETSFECKQLVLGWTCELLRATKAYMATLSATSELQQLADALLSNGGVASSCQPTIAQLACACLEQLVAPQMNWKSDRLMAILEVCMLQISSTDEVVSARFCQLMMRLPWTFVISGMQVALTKHKSPCWKRTAAERSHLTRGTNGEMQTQQFKQFMAFLLQGHNQSSDLQWLREVFSVCWSVCEPSSDVSVFAHASTPMLLSWATWETAQLCISCKLRTPLGKPLDTFMAFEGAIKGLARETTSTAHKAVTESSLDESGGCSPTYNLRRVRLLIELVEQLEKTMYNAADGTATALVAPTKPVRTFFHTNKSTCGEWLARIRLAVVVVSLHCGLAASAVRNGHCLLQDLLDSGNTQGPELETAVLYVAWGLSRLHEAEAVQGLYAWCRDTLKCKFAFLKPIVEHAASRYETAIDQYKMVLNNEAFDSPAKSSAAVSDDVERKTSLNNIAHILRPLVADQLTECYLALQDWSGLQKWKEMEAEYILNQNGNASKRFKHVTETSARALQAFDEGD | |||||||||||||||||||
1 | 5vchA | 0.09 | 0.09 | 3.34 | 1.25 | SPARKS-K | VRHANARVIASIGSEWPIPNLLQAAPKIRETAIFIILSLLESIDDFLNLFAQTINDSASLEYVSSLIEEEGEINPQYAAKASLIPSVVQVLDATIREG-DTTNTKLIFNCLNDFLLLDSQLTG-----NTIADLVKLALQIAVNS-DVDEDIRVFAVQFVTSALVYRAKLGPEITLAALKVASDELTNEENTPALTALRLISNASPSQVGVPIIEHLPTLSSPFERRSILLAISVLVTGSPDYTLSQFDKIIPATVTGLKDSEAQLAALKCIVQLSTNLQDERYHEQYLPLVIDIIDYKYATLALDGLLEFKLFLETQQSPKLRAAIVSAIGSCAFAAGSGFVPYFKTQFIQNVSQILSEDDIELKALTFENIST------------GRAVK--SAAFAEYAEPLVNAAYEAIKRLRESGYAFIANAKVFAPFLQTIIPEIFKTLEQEEYTIAYEKEVAAAALSELAIA------------SKEHFLEYVEPSLKVLAEQVNESETALHAIVKAVLLTANLKEGEYPKGVPSGSYVDASALAVIQTVREVSLNNVISVFQDLSELTHLDQLCREALSVLKGEQTILDASETEATDVALDIYVALSTNL | |||||||||||||
2 | 4ui9O | 0.12 | 0.10 | 3.54 | 1.72 | FFAS-3D | ---VTP--YKI-------------------AVLVLLSEMS--------------------------------RTGEGAVSLVERRRLNQQLLPLLQGPDISKLLKLIEESCPQLANSVQIRIKLMAEGEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFENKKPLSQKQAEFFLSQQASLL----------KNDETKALTPASLQKELNNLLKFNP--DFAEAHYLSYLNNLRVQ-DVFSSTHSLLHYFDRLILTGAESKSNG---EEGYGRSLRYAALNLAALHCR------FGHYQQAELALQEAIR-IAQE----------------------SNDHVCLQHCLSWLVLLEHSVKKAVHFGLPYLASLGKTANKLMDALKDSDSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEQQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLRSSSPTIALPMLLQALALSKENLAFAQLILGIPEQALSLLHMAIEPILADGAIASYDQPKKAEALEAAIENLNE-- | |||||||||||||
3 | 1u6gC | 0.11 | 0.10 | 3.77 | 1.15 | MUSTER | VVSTRHEMLPEFYKTVSPALISRREENVKADVFHAYLSLLKQTRPVGETPLTMLQSQVPNIVKALHKQMKEKSVKLPGALTQHIPVLVPGIIFSLNDKSSSNLKIDALSCLYVILCN----HSPQVFHPHVQALVPPVVACVG---DPFYKITSEALLVTQQLVKVIRPLDTPYIKDLFTCTIKRLKAIDQEVKERAISCMGQI-ICNLGDNLGSDLPKNEITRLTTVKALTLIAGSPLKIDL-RPVLGEGVPILASFLRKNQRLSALDILIKNY-SDSLTAAMIDAVLDELPPLISDMHVSQMAISFLTTLAKVY---PSSLSKISGSILNELIGLVRSPLLQGGALSAMLDVTGTNNLGYMDLLRMLTGPVKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVG--HHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTIS-DHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNK | |||||||||||||
4 | 4xriA | 0.12 | 0.09 | 3.27 | 1.72 | CNFpred | -----PELMHALVRN-----ASEGGQHQKQASLTAIGFICETQ-----DTDLRNSL------------------------VGHSNAILTAVVQGARKEENNEVRFAAITALGDSLEFVGNNFKHEGERNYIMQVVCEATQAQ------DSRIQQGAFGCLNRIMALYYHMRYYMEKALFGLTILGMKSDDEDVAKLAVEFWSTVCEEIAIEDDNAQVESSEQMRPFYNFARVA----------TNEVVPVLLQLLTKQ-DEYNISRAAYQCLQLYAQAV--STIIPPVIQFVEHNL-DWHFRDAAVSAFGAIMDG--PEEKVLEPIVKTGMQPLIAMMED----------------ESIQVRDSTAYALGRITEACSEAID---------------------------PNTHLEPLIRSLFNGLMNSKMAASCCWALMNIAERFAGEPGAAQNPLTPHFNQSVTNLLTVTRTAAYEVLSVFVQNA-------ANDSLSAVASLSTVILQRLEETLPLQQQVVSVEDKLI--------------LEDMQTSLCTVLQATVQRLDIAPQGDRIMQVLLQILSTCGGKS-----SVPEGVFAAISALANAM | |||||||||||||
5 | 5mqfM | 0.07 | 0.07 | 2.82 | 1.77 | Neff-PPAS | LLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLEQLISRRPLLLNSVLLRQNPHHVHE-WHKRVALHQGRPREIINTYTEAVQTKATGKPHTLWVAFAKFYEDNGLEKATKVNFKQVDDLASVWCQCGELELRHEALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEES------------LGTFQSTKAVYDRILDLRIATP--QIVINYAMFLEEHKYFEESFKAYERGISLF-----KWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTT------GAFWQTWKDFEVRHGNED | |||||||||||||
6 | 5ifeC | 0.10 | 0.10 | 3.54 | 1.60 | PROSPECTOR2 | LPFLKPDLLKIKAREFGAGPLFNLEDQERHLLVKVIDRILYKLDDLVRPYEIISNLAKAAGLATMISTMRPDIDNMDEYSALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAIL-----PHLRSLVEIIEHGLV---DEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQALDRRNYRQLVDTTVELANKVGAAEIIDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKNALGKRVKPYLPQICGTVLWRLNNKSAKVRQVVMKTCQEEKLMGHLGVVLEVLGSILGALKAIVNVIGMHKMTPPPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLK----AHKKAIRRATVNTFGYIAKLQNRVCTTVAIAIVAETCSPFTKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLQHMSLGVYGFGCEDSLNHLLNYVWPNVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPA-------RKVRDVYWKIYNSIYIGS | |||||||||||||
7 | 5ifeC | 0.09 | 0.08 | 3.07 | 1.20 | SPARKS-K | ARVEGREIISNLAKAAGLATMISTMEYVRNTTARAFAVVASALGILLPFLKAVCKSKKSW------------------QARHTGIKIVQQIAILMGCAIQQKVRTISALAIAALAEAADSVLKPLWKGEYANYYTREVMLILIREFQSDEEMKKIVLKVVKQCCVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAEQTTEDSVMLNGFGTVVNALGKRKPYLPQICGTVLWRLVRQQAADLISRTAVVMKTCQE------EKLMGHLGVVLYEYLGEEYP-----------------------EVLGSILGALKAIVNVI------GMHKMTPPIKDLLPRLTPILKKVQENCIDLVGRIADRGAEYVEWMRICFELLELLKA----HKKAIRRATVNTFGYIAKAIGPVCTTVAIAIVAETCSPFLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQLGVYGFGCEDSLNHLLNYVWPNVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPA-------RKVRDVYWKIYNSIYIGS | |||||||||||||
8 | 5me3A | 0.09 | 0.08 | 3.12 | 1.66 | FFAS-3D | ----LPDLLKKLLSIFKHINIESVALQGIGLIGSTILDIRLSSNLIHAYRTCLAYCTNSVQHHTLIESIHAVEILLTSELINMYEPYLKLVLSLLERH-KVKLRSGAIRCLALLISKKDAILELIELGSSYIDFYQHININY---NDDSMLVRKHVLRMNQIIYDDTE--DIIIKAYVASRILRRIEDEEDVIIETARSELLKRWLCLLTDQVIEMVIENEEEGRNIMKFLSV-LSSCQDSFITKDHITALYPYLH---SDSDFQLHILKVYRNTFEQLSHFK--PKFLYDLETTILSRLELDEAIPLSWS-LSRHRKDDTRICKACASCLGQLSPYIANATTDPRPDGSFENNLKTRENIFEYVTKCLLMFTKNLLTVLDTQFEKGILDIQLVVESLYDFFLANDGICSALVSRYLDKILKICLIAD--LNNAMVAIRFLKQILTYGYTNPSLCVPTVIALTESMAFNCLNQGIRLGTEYAVKIRPKQSMFLRRLQQLMSTNRSKFLKVVKKTVFSNYLSTSVNYEE---------------SCYHIIYLLHNLSKIYDNMLELYEMLRSVISVSEYFSDRISERLDGFNTAAERFMFELTLLDDEN | |||||||||||||
9 | 3ea5B | 0.11 | 0.11 | 3.85 | 1.15 | MUSTER | AW---PELMKIMVDNTG-----EQPENVKRASLLALGYMCESANNILIAVQGAQSTETSKAVRLA--ADSLIFIKNNMEREGERNYLMQVVCEATQAE-DIEVQAAAFGCLCKIMSKYYTFMKPYME-QALYALTIATMKS------PNDKVASMTVEFWSTICEESYNFALSSIKDVVPNLLNLLTRQNENVSMSAGACLQLF-LEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQHPKVATNCSWTIINLVEQAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFS-EYATDTVAETSASISTFVMDKLGQTMSVDEQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAF-IEDDVFYAISALAASLGKGEKYLETFSPYLLKALNQVDSPTAVGFIADISNSLEEDFRRYSDAMMNVLAQLKPAVLSVFGDIASNIGADFIPYVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHKPEALFPYVGTIFQFIAQVEDPQLYSEDATSRAAVGLIGDIAAPD | |||||||||||||
10 | 2bkuB | 0.10 | 0.08 | 2.88 | 1.71 | CNFpred | -----PELMKIMVDNTGA-----QPENVKRASLLALGYMCESAD----------------------------------ALVSSSNNILIAIVQGAQSTTSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAE------DIEVQAAAFGCLCKIMSKYYFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTIC-------------------EEEIDIAYELAQ-LQSYNFALSSIKDVVPNLLNLLTRQNVSMSAGACLQLFAQNC--NHILEPVLEFVEQNI-NWRNREAAVMAFGSIMDGP--DKVQRTYYVHQALPSILNLMND----------------QSLQVKETTAWCIGRIADSVAESIDPQQ-HLPGVVQ----ACLIGLQDHPKVATNCSWTIINLVEQLAEA-NFYPALVDGLIGAANRI-----DNEFNARASAFSALTTMVEYASASISTFVMDKLGQTMSVDENQLLEDAQSLQELQSNILTVLAAVIRKSP--------------SSVEPVADMLMGLFFRLLEDDVFYAISALAFEKYLETFSPYLLKALNQV-------DSPVSITAVGFIADISNSL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |