Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | QLKPALGLPPTKLAPDQATLLNQQQSNQVFPSLSLIPLTQMLTLGQDLQLLNPAAGMTPGTQTHPLTLGGLNVQQQLQPHMLPIFVTHLGAQGTILSSEELPLAPQIFTGLIIHSLFPGGILPTSQAGANPNVQDGRLPAGQAGVNPAIQGTPAGHLPIPSSTDDEFAMTTPAGIQRSTDAMEETTTESPNG |
1 | 6e5p2 | 0.07 | 0.07 | 2.79 | 1.43 | Neff-PPAS | | -PGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHK----MRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS-- |
2 | 4k0mC | 0.09 | 0.09 | 3.36 | 1.09 | PROSPECTOR2 | | KVYTIARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
3 | 5aftV | 0.08 | 0.07 | 2.67 | 0.91 | SPARKS-K | | --SGNKVSRQSVLCGS--QNIVLNGKTIIMNDCIIRGDLANVRVGRHKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEED-CVVNAAQIGSYVHVGKNCVIGRR---------CVLKDCCKILDNVLPPETVVPPFTVFSG-------CPGLFSGELP--ECTQELMIDVTKSYYQKFLPLTQV-------- |
4 | 1s1iB | 0.14 | 0.12 | 4.10 | 0.41 | FFAS-3D | | ---------SGRGAP--LAKVVFRDPYKYRLREEIFIANEGVHTGQFIYAASLNVGNVLPLGSVPEGTIVSNV--EEKPGDRGALARASGNYVIIIGHNPDENKTRV-------------RLPSGAKGVIAGGGRVDKPLLKAGRAPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQGLIAARRTG |
5 | 5aj3c | 0.21 | 0.10 | 3.15 | 0.27 | HHpred | | ---------------------------------------------PQIQYKNPWVQI---------TMFKN-------MTPSPFLRFYLGEQVLVKSNKEI------VEHIRK--I-----L--GKNEETLE--KEEQE-KKQLSHPAHFGPREGQVPCPGLVPLPKEMT---------------------- |
6 | 2nbiA | 0.14 | 0.14 | 4.78 | 0.97 | MUSTER | | QPSD----LNPSSQPSECADVLEECPECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTADVLPFPNNLGCPAFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSS |
7 | 2xhbA | 0.09 | 0.02 | 0.80 | 0.48 | CNFpred | | -------------------------------------------------------------------------------EFFPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAYRNELAPNK------------------------------------------------------------------- |
8 | 2pffB | 0.21 | 0.20 | 6.28 | 0.92 | HHsearch-2 | | EAYPNTSLPPSILE-DSLENNEGVPSP--MLSISNLTQEQHLPAGKEISLVNGAKNLVVSPQSLNLTLRKAKAPSGLDQSRIPFSERKL-----KFSNRFLPVASPFHSHLLVPAS--DLINKLVKNNVSFNAKDIQIPVYDTFDLPVKWETTTQFKATH---ILDFGPGGASGLGVLTHRNKDGTDINPDD |
9 | 3jc8Na | 0.05 | 0.04 | 2.04 | 1.16 | Neff-PPAS | | ----VANYLWYDDRQSELEAHQAGVASTK---------ARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMM-DALASATPKKVWVKTFSENNNAVSIDGSAVSHDEVAEFMRGNGVVWTPKGMGRLVDRRRDSKTARVEMLTSDATIEEFPEAQVSPFF--KNIDLQTAKQVGGAQVGVPI |
10 | 5aj3c | 0.20 | 0.15 | 4.66 | 0.37 | HHsearch | | ---PMKG--R---FPIRRTLQYLGQGDVVFKSVKVMGARKFVFFIPQIQYKNPWVQI---------TMFKN-------MTPSPFLRFYLGEQVLVKSNKEI------VEHIRK--I-----L--GKNEETLE--KEEQE-KKQLSHPAHFGPREGQVPCPGLVPL------PKEM-TGKYKAALKAT----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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