Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV |
1 | 5jcss | 0.11 | 0.11 | 3.80 | 0.96 | SPARKS-K | | NKPDQLIQSSVYDSIFSEAADCFAGAILEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSI-----KIGRAVLLKEKLNIQKKSMNSTAFTNHSLRLMEQISVCIQMTEPV |
2 | 4hr3A1 | 0.15 | 0.11 | 3.54 | 0.49 | FFAS-3D | | -----SARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTLDSLAAGLWNLFLPDPELGGGLSNSEYAPLAEQMGRSLF----------------------------- |
3 | 1yvlB2 | 0.21 | 0.15 | 4.73 | 0.27 | HHpred | | ----DNKRKEKIIELLNVTELTQNLVEWKRRQQSA--CIGGPPNACLDQLQNWFTI---VAES----L--QQVRQQLKKLEEL-----EQKYTYEH--DPIT------------ |
4 | 1w9rA | 0.17 | 0.16 | 5.21 | 0.90 | MUSTER | | AEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP------ |
5 | 4fyeA | 0.15 | 0.07 | 2.36 | 0.37 | CNFpred | | DVSDLNQQITEKENALKEVKGA-YREALFSYFEEYQKGEGKWDQAKLDQLKNQV------------------------------------------------------------ |
6 | 2pffB | 0.24 | 0.24 | 7.39 | 0.75 | HHsearch-2 | | ADDEPTTPAELVGKFLGYVSSLVEPSKVGILEDSLENNEGVPSPMSVNKTNSHLPAGKQVEINGKNLVVSGPPQTLRKGLDQSRIPFSERKLVASPFHVPASDLINKDLVKNNV |
7 | 1w9rA | 0.17 | 0.16 | 5.21 | 1.06 | Neff-PPAS | | AEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP------ |
8 | 3wz4A | 0.12 | 0.11 | 3.75 | 0.47 | HHsearch | | HQSNQAAIFVNYRDELQASSGFFTAEGWDQFLGALEQS------NNLDAVKAKVARAPIIGVLNGRYSWRVQPIL-VTYQSASE--FTQQNNVRVSTNSPRGIGISQFVVGPA- |
9 | 4n69A2 | 0.12 | 0.10 | 3.44 | 0.74 | SP3 | | ----KGFLACQAHRVAHLLWRQSRRPLALALHSRIANVFAVDIHPAAR-----IGKGILFDHATGVVVG--ETAV----IGNNVSILHHVTLGGTGKVGGD----RHPKIGDGV |
10 | 1w9rA | 0.12 | 0.11 | 3.75 | 0.56 | PROSPECTOR2 | | GSHMPEKKVAEAEKKVEEAKK-----KAEDQKEEDRRNYPTNTYKTLELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKV------KEKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|