Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | EKTESLCPEVPARGCRAFPGHLLRSLPKQHCENQGSLLQFDRQAPGCISTSPTLRRLRNRGCGAWHSLPQQDALQVLTWEGWREPAGSLCYLSKRLLGSPKDPSYLLSPLGLCSRLTPEPERALNTADSLEPQTRPTDQYVPLELQPVNEGSLHQVSLLQQESHFLPSPTPRCPSPQGEELYPSRCVCIYVLWCYDIC |
1 | 6f1tg | 0.07 | 0.07 | 2.87 | 1.06 | SPARKS-K | | YPELLVASYNNNEDAPHEPDGVALVWNMKHCQSAVMSATFAKFHPNLVVGGTY-----SGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNV--VGTQNAHNLISISTDGKICSW-SLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEHQGPITGIHCHAVDFSH |
2 | 2nbiA | 0.17 | 0.16 | 5.17 | 1.07 | MUSTER | | -QPSDLNPSSQPSECAVLEECPIDECFLPYSDASRPPSCLSFGRPD-CDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSP--PICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLD-TCFLPTSDPARPPDGRPDCDVLPFPNPDNPMFTPSPSPPNCSPTMLPTPQPSTPTVITSPAPSSQP------QCAEVC |
3 | 4b03D | 0.06 | 0.05 | 2.20 | 1.54 | Neff-PPAS | | --------------------------FHLTTRGGEPHMIVSKQERGKSLLFKT-----SAGVNMCTLIAMDLGELCEDTMTYKCPRITETEPDDVDCWCNATETWVTYGTCSQTGEHRRDKRSVALAPHVGLGLETRTETWMSSEGAWKQIQKVETWALGHPGFTVIALFLAHAI--GTSITQKGIIFILLMLVTPSM |
4 | 4k0mC | 0.05 | 0.05 | 2.32 | 1.18 | PROSPECTOR2 | | KVYTIDEAARTAKFDETVEV---------HAKLGIDPRRSDQNVRGTVSLPHGLKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
5 | 5jcss | 0.05 | 0.05 | 2.36 | 0.96 | SPARKS-K | | NEDHQKDSSNKIYNLNMIGMRIWNVIELEE-PSEEDLTHILAQLTNLIPKIDSYKNVKSIYMNTKFISLNKGAHDLIKLCELDILFKNNGINKPDQLIQSSVYDSIFDCFAGAIGEFKALEPIIQAIGESSSRISLFLTQHVPTLENLDDSIKILKEKLNIQKKSMNSTLFAFTNHSLSVCIQMTEPVLLVGETGTGK |
6 | 3cnfB | 0.12 | 0.12 | 4.07 | 0.47 | FFAS-3D | | RSLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDLRRLSVGRLITNPRIARVRIMYLTDDDPDPDFHRLFSSSLANKRNRTGMAYPINERAGMSKLVADNIIASVIKSNSIMTAPKGKLFHLQFMDGLLRPEASGEMRLIYPLQPISVARSMRAIVNHNEVDRPREMDTGTNGDLLYSPV------------- |
7 | 5nd1A | 0.20 | 0.13 | 4.20 | 0.36 | HHpred | | ----------AVHLRGYIPMAAMNMLPI--TDGDCDLVVATRTRPGRMSTSPEAHR-RGVLASDYH-------VDIATDGNIRHVAREVYTVADIPTVSERVSGLALRPYRSCVRDASTLHSMLCGAVPGGEPMKLGDNTPVTNRQALRP------------------------------------------------ |
8 | 6fj3A | 0.06 | 0.06 | 2.49 | 1.03 | MUSTER | | TKGIDSF--WNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF |
9 | 4i6jB | 0.19 | 0.07 | 2.27 | 0.28 | CNFpred | | -----------------------------------SSLKID----DTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSP--------AGILCVADQC--------HGLRELALNYHLLSD--ELLLALSS--------------------------------------------------------------------- |
10 | 1ev11 | 0.14 | 0.12 | 4.14 | 0.50 | HHsearch-2 | | ADTVQTSPNLTAVETGHTSQAVPGDTMQRHVINNHSENFLARSACVFYTTAQLRRKLEMFTYL-------RFDMEITVVITSSQAPVLTHQIMYVPPGGPIPVSVDDYSWQIFWSIPISIGNAYSNFYDGWSHFSQA--GVYGFTTLNNMGQLFFRHVNKPN----PAA---------I----TSVARIYFAWVPRLC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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