Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | SRDSGGYYHPARLGAALWGRTRRLFWASPPGRWLQARIELGSPDEDPERQEDEQDVEDDYYDMEGGREEVESREEGQPCGEEPSPQQGPGPAEEAHDGDASDADDAEGALALSCQGPAGSGGSAEALLSDLHAFAGSAAWDDSARPAGGQELHVTAL |
1 | 3jc8Oa | 0.06 | 0.06 | 2.55 | 1.03 | SPARKS-K | | QFVKAPPAIKFGGLAFVVGALTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEIAQNLNERRREMDVLEQKLSEALTELPEQRDIEENDIGKKSGLELSSVTPGKESVGGGEFFSGNYHEIALFLQEMANMRRIVNVNNAKLKNEKVVLQSEFQ |
2 | 6c0fI | 0.12 | 0.08 | 2.72 | 0.37 | FFAS-3D | | ----------------------------------LKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTRVYDETINK--EVEGDEDDLMRYFNSNSNEPPKNAKKSAYEFANILIEILPNVT------------------ |
3 | 1k1yA | 0.15 | 0.11 | 3.85 | 0.37 | HHpred | | -IVVAGFYEPVRLVQIEMLYARK-LGYDAKGVWLTERVWQPE------LVKSLREAGIEYVVVD----------DYHFMSAGLSKEEWPYYTED--------GGEVITVFKLRYLIP---FRPVKKTIEYLESLTSD----------DPSKVAVFHD |
4 | 2otoB | 0.11 | 0.09 | 3.25 | 0.89 | MUSTER | | -AANNPAIQNIRLRHENKDLKARLENAEVAGRFKRAEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE----------------------- |
5 | 3m1iC | 0.15 | 0.05 | 1.71 | 0.39 | CNFpred | | -----------NLINKSDLTLVQILKQEWPQNWPEFIPELIGS-------------------------------------------------------------------------SSSSVNVCENNMIVLKLLSE--------------------- |
6 | 1rb8G | 0.16 | 0.08 | 2.75 | 0.46 | HHsearch-2 | | -------------------------------------------------------MYQNF------------------VTKHDTAIQTAAPTGNIPV----INGGSVVNLYANMNVSTSSDGSFIVAMSDINVFVGVICSSAKSGRVIGQIHEYQVL |
7 | 5xuaA | 0.09 | 0.08 | 2.96 | 0.98 | Neff-PPAS | | -------MQEPLTKERLISDWNSNVSVA--VARTTAIAKSSDASLVQFLAADAAATTKSTANVLKQIEPLITQPAEREILDKIMQVRKTYIASRDKVSQLKADGMAEEAESTLINSYVPAAQGYLKLLGELLNLQRASLDAKAAEVEQIE------- |
8 | 2xsuA1 | 0.10 | 0.03 | 0.96 | 0.39 | HHsearch | | ----------------------------------------------------------------------------------HH---------------HHNRQQIDALVKQ-MNVDTAKPVDEVRLLGDLFQAIEDLDI----------------- |
9 | 2otoB | 0.11 | 0.10 | 3.43 | 0.61 | SP3 | | -AANNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE----------------------- |
10 | 2mxxA | 0.13 | 0.11 | 3.98 | 0.69 | PROSPECTOR2 | | ARNNDGAYHDGEIRAEAAADPAVVAAK-------AALDAVEGGSHNYGEVKAAYEAAFNNAFNAVRNKYVQRFQATYNNATEQEGKTYIQGEARYLKRVGAANNQNPAAEDKGATTPASKEEA-----------KKSEAAAKNAGKAAGKALPKTSA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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