Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VSFQVRDVEFLFLKEAGQDIMRNSSMRSSTQAMLVGSGTPLPLLNATYGPLLVQRTITPDLLGLPTQLFRPSPDVSSAGWRVRWHVLSRSVTSLSPRLRVLFYVAGRDWDRGEREPGGAADQLPCVTVFAFWQTQEV |
1 | 3qd1X1 | 0.08 | 0.08 | 3.14 | 0.81 | SPARKS-K | | VEYHDVKGD--MIQSVTTSFDDTSRLLTWTINLTPRQVKSNLGALVSISGNQETRTVTINYNSGGAWNLYTGESVNNNVLRITTQVN-DTGGEVKLGLRLVTSITKTNLPLEFSQVAATTNGSWDKAGYNTTIVEK- |
2 | 3k0yA | 0.07 | 0.07 | 2.75 | 0.46 | FFAS-3D | | YYLRLDDGDKLWPAATNYPNYQPKPNQRALVNFTILADSHYIKVN-AIHNILTKSIAKDSIYGTDPVSIYNNNWIGDGYLNIYINLIQPDAENDPYTLE-FRHNAYDDPQYTISSLPDTKGETVDLVVNYWTSEGK- |
3 | 4iupA1 | 0.18 | 0.07 | 2.14 | 0.20 | HHpred | | ------------------------------------------------------------------LAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFS--HDEWVN----------VKTSVRE--------- |
4 | 4aq1A5 | 0.11 | 0.09 | 3.45 | 0.84 | MUSTER | | QDIKVD-ATSVKLSDEAVGGGEVEGVNQKTIKVSAVDQYGKEIKFGTKGKVTVTTNT-EGLVIKNVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTSTK---------TITVNVVNV---- |
5 | 3eh1A | 0.07 | 0.04 | 1.78 | 0.68 | CNFpred | | ---------------------------GFEAVMRIRCTK-GLSMHTFHGNFFVRSLLSLANINPD-------------AGFAVQLSIEESLTDSLVCFQTALLYTSS--------------GERRIRVHTLCLPVVS |
6 | 1kooC1 | 0.10 | 0.04 | 1.36 | 0.53 | HHsearch-2 | | IEFHYENTRAFFVEDASTSALKAVNYKILDRE----NRRISIIINSSAPPHTILN---------------------------------------------------------------------------------- |
7 | 4aq1A5 | 0.10 | 0.09 | 3.26 | 0.89 | Neff-PPAS | | -QDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVSAVDQYGKEIKFGTKGKVTVTTN-TEGLVIKNVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTP----------TSTKTITVNVVNV--- |
8 | 1l2zA | 0.18 | 0.08 | 2.62 | 0.38 | HHsearch | | ------------------------------DVMWEYKWENTG-DAELYGPFTSAQMQTWV---S-EGYFP-------DGVYCR--KLDP---PGG------------QFYNSKRI----DFDLYT------------ |
9 | 4aq1A5 | 0.10 | 0.09 | 3.25 | 0.68 | SP3 | | LQDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVSAVDQYGKEIKFGTKGKVTVTTN-TEGLVIKNVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTSTKTITVNNV--------------- |
10 | 4aq1A5 | 0.09 | 0.08 | 3.01 | 0.67 | PROSPECTOR2 | | VLQDIKDATSVKLSDEAVGGGEVEGVNQKTIKVSAVKFGTKGKVTVTTNTEGLVIK--------NVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPT-------------STKTITVNVVNV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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